| Extracting biological meaning from large gene lists with DAVID DW Huang, BT Sherman, X Zheng, J Yang, T Imamichi, R Stephens, ... Current protocols in bioinformatics 27 (1), 13.11. 1-13.11. 13, 2009 | 440 | 2009 |
| Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts L Ma, Z Chen, DW Huang, G Kutty, M Ishihara, H Wang, A Abouelleil, ... Nature communications 7 (1), 10740, 2016 | 194 | 2016 |
| The HIV-1 envelope protein gp120 impairs B cell proliferation by inducing TGF-β1 production and FcRL4 expression K Jelicic, R Cimbro, F Nawaz, DW Huang, X Zheng, J Yang, RA Lempicki, ... Nature immunology 14 (12), 1256-1265, 2013 | 106 | 2013 |
| miR-192-5p silencing by genetic aberrations is a key event in hepatocellular carcinomas with cancer stem cell features Y Gu, X Wei, Y Sun, H Gao, X Zheng, LL Wong, L Jin, N Liu, B Hernandez, ... Cancer research 79 (5), 941-953, 2019 | 85 | 2019 |
| A benchmark study on error assessment and quality control of CCS reads derived from the PacBio RS X Jiao, X Zheng, L Ma, G Kutty, E Gogineni, Q Sun, BT Sherman, X Hu, ... Journal of data mining in genomics & proteomics 4 (3), 2013 | 83 | 2013 |
| IL-27 inhibits HIV-1 infection in human macrophages by down-regulating host factor SPTBN1 during monocyte to macrophage differentiation L Dai, KB Lidie, Q Chen, JW Adelsberger, X Zheng, DW Huang, J Yang, ... Journal of Experimental Medicine 210 (3), 517-534, 2013 | 83 | 2013 |
| GNAI1 and GNAI3 reduce colitis-associated tumorigenesis in mice by blocking IL6 signaling and down-regulating expression of GNAI2 ZW Li, B Sun, T Gong, S Guo, J Zhang, J Wang, A Sugawara, M Jiang, ... Gastroenterology 156 (8), 2297-2312, 2019 | 74 | 2019 |
| MiR‐125b loss activated HIF1α/pAKT loop, leading to transarterial chemoembolization resistance in hepatocellular carcinoma X Wei, L Zhao, R Ren, F Ji, S Xue, J Zhang, Z Liu, Z Ma, XW Wang, ... Hepatology 73 (4), 1381-1398, 2021 | 62 | 2021 |
| Identification of microRNAs specific for epithelial cell adhesion molecule–positive tumor cells in hepatocellular carcinoma J Ji, X Zheng, M Forgues, T Yamashita, EL Wauthier, LM Reid, X Wen, ... Hepatology 62 (3), 829-840, 2015 | 62 | 2015 |
| Interleukin-27 treated human macrophages induce the expression of novel microRNAs which may mediate anti-viral properties S Swaminathan, X Hu, X Zheng, Y Kriga, J Shetty, Y Zhao, R Stephens, ... Biochemical and biophysical research communications 434 (2), 228-234, 2013 | 57 | 2013 |
| Analysis of microarray data on gene expression and methylation to identify long non-coding RNAs in non-small cell lung cancer N Feng, T Ching, Y Wang, B Liu, H Lin, O Shi, X Zhang, M Zheng, ... Scientific reports 6 (1), 37233, 2016 | 46 | 2016 |
| Extended ORF8 Gene Region Is Valuable in the Epidemiological Investigation of Severe Acute Respiratory Syndrome–Similar Coronavirus S Chen, X Zheng, J Zhu, R Ding, Y Jin, W Zhang, HY Yang, Y Zheng, X Li, ... The Journal of Infectious Diseases 222 (2), 223-233, 2020 | 39 | 2020 |
| Towards better precision medicine: PacBio single-molecule long reads resolve the interpretation of HIV drug resistant mutation profiles at explicit quasispecies (haplotype) level C Raley, MK Jiang, X Zheng, D Liang, MT Rehman, HC Highbarger, ... Journal of data mining in genomics & proteomics 7 (1), 182, 2015 | 34 | 2015 |
| LIM kinase 1-dependent cofilin 1 pathway and actin dynamics mediate nuclear retinoid receptor function in T lymphocytes M Ishaq, BR Lin, M Bosche, X Zheng, J Yang, D Huang, RA Lempicki, ... BMC molecular biology 12, 1-14, 2011 | 33 | 2011 |
| Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts. Nat Commun 7: 10740 L Ma, Z Chen, DW Huang, G Kutty, M Ishihara, H Wang, A Abouelleil, ... | 32 | 2016 |
| Loss of miR-192-5p initiates a hyperglycolysis and stemness positive feedback in hepatocellular carcinoma Y Gu, F Ji, N Liu, Y Zhao, X Wei, S Hu, W Jia, XW Wang, A Budhu, J Ji, ... Journal of Experimental & Clinical Cancer Research 39, 1-17, 2020 | 26 | 2020 |
| Transcriptome integration analysis in hepatocellular carcinoma reveals discordant intronic miRNA-host gene pairs in expression Y Sun, F Ji, MR Kumar, X Zheng, Y Xiao, N Liu, J Shi, L Wong, M Forgues, ... International journal of biological sciences 13 (11), 1438, 2017 | 25 | 2017 |
| Blocking hepatocarcinogenesis by a cytochrome P450 family member with female-preferential expression F Ji, J Zhang, N Liu, Y Gu, Y Zhang, P Huang, N Zhang, S Lin, R Pan, ... Gut 71 (11), 2313-2324, 2022 | 24 | 2022 |
| Detection of pretreatment minority HIV-1 reverse transcriptase inhibitor-resistant variants by ultra-deep sequencing has a limited impact on virological outcomes B Su, X Zheng, Y Liu, L Liu, R Xin, H Lu, C Huang, L Bai, F Mammano, ... Journal of Antimicrobial Chemotherapy 74 (5), 1408-1416, 2019 | 21 | 2019 |
| Distinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long reads M Liang, C Raley, X Zheng, G Kutty, E Gogineni, BT Sherman, Q Sun, ... BioData mining 9, 1-13, 2016 | 20 | 2016 |
