Scheila de Avila e Silva
Scheila de Avila e Silva
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BacPP: bacterial promoter prediction—a tool for accurate sigma-factor specific assignment in enterobacteria
SA e Silva, S Echeverrigaray, GJL Gerhardt
Journal of theoretical biology 287, 92-99, 2011
DNA duplex stability as discriminative characteristic for Escherichia coli σ54-and σ28-dependent promoter sequences
SA e Silva, F Forte, ITS Sartor, T Andrighetti, GJL Gerhardt, APL Delamare, ...
Biologicals 42 (1), 22-28, 2014
Gene regulatory networks of Penicillium echinulatum 2HH and Penicillium oxalicum 114-2 inferred by a computational biology approach
AR Lenz, E Galán-Vásquez, E Balbinot, FP De Abreu, ...
Frontiers in microbiology 11, 2566, 2020
Rules extraction from neural networks applied to the prediction and recognition of prokaryotic promoters
GJL Gerhardt, S Echeverrigaray
Genetics and molecular biology 34, 353-360, 2011
Bacillus subtilis promoter sequences data set for promoter prediction in Gram-positive bacteria
RV Coelho, SA e Silva, S Echeverrigaray, APL Delamare
Data in brief 19, 264-270, 2018
Bacterial promoter features description and their application on E. coli in silico prediction and recognition approaches
S Silva, S Echeverrigaray
Bioinformatics. InTech 1, 241-260, 2012
Analysis of the nucleotide content of Escherichia coli promoter sequences related to the alternative sigma factors
G Dall'Alba, PL Casa, DL Notari, AG Adami, S Echeverrigaray, ...
Journal of Molecular Recognition 32 (5), e2770, 2019
Characterization of promoters in archaeal genomes based on DNA structural parameters
GS Martinez, S Sarkar, A Kumar, E Pérez‐Rueda, S de Avila e Silva
MicrobiologyOpen 10 (5), e1230, 2021
IntergenicDB: a database for intergenic sequences
DL Notari, A Molin, V Davanzo, D Picolotto, HG Ribeiro, SA e Silva
Bioinformation 10 (6), 381, 2014
Machine learning and statistics shape a novel path in archaeal promoter annotation
GS Martinez, E Pérez-Rueda, S Sarkar, A Kumar, S de Ávila e Silva
BMC bioinformatics 23 (1), 1-14, 2022
Analysis of carbohydrate-active enzymes and sugar transporters in Penicillium echinulatum: A genome-wide comparative study of the fungal lignocellulolytic system
AR Lenz, E Balbinot, NS de Oliveira, FP de Abreu, PL Casa, ...
Gene 822, 146345, 2022
Multilanguage health record database focused on the active follow-up of patients and adaptable for patient-reported outcomes and clinical research design
L Pellizzoni, SA e Silva, A Falavigna
International Journal of Medical Informatics 135, 104065, 2020
Perspectivas e Potencialidades da Interface Cérebro-Máquina
Revista de Sistemas de Informação da FSMA 13, 2014
An artificial neural network classification method employing longitudinally monitored immune biomarkers to predict the clinical outcome of critically ill COVID-19 patients
G Martinez, A Garduno, A Mahmud-Al-Rafat, AT Ostadgavahi, A Avery, ...
PeerJ 10, e14487, 2022
Taxonomy, comparative genomics and evolutionary insights of Penicillium ucsense: a novel species in series Oxalica
AR Lenz, E Balbinot, FP de Abreu, NS de Oliveira, RC Fontana, ...
Antonie van Leeuwenhoek 115 (8), 1009-1029, 2022
A survey of biological data in a big data perspective
G Dall'Alba, PL Casa, FP Abreu, DL Notari, S de Avila e Silva
Big Data 10 (4), 279-297, 2022
BacPP: a web-based tool for Gram-negative bacterial promoter prediction
SA e Silva, DL Notari, FA Neis, HG Ribeiro, S Echeverrigaray
Genet. Mol. Res. 15, gmr7973, 2016
O consumo na sociedade moderna: consequências jurídicas e ambientais
AOK Pereira, C Calgaro, HMK Pereira
Caxias do Sul, RS: Educs, 2016
Differentially regulated targets in the fast-acting antidepressant effect of (R)-ketamine: A systems biology approach
E Scotton, PL Casa, FP de Abreu, SA e Silva, RLB Wilges, MV Rossetto, ...
Pharmacology Biochemistry and Behavior 223, 173523, 2023
DNA structural and physical properties reveal peculiarities in promoter sequences of the bacterium Escherichia coli K-12
GS Martinez, S de Ávila e Silva, A Kumar, E Pérez-Rueda
SN Applied Sciences 3, 1-10, 2021
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