Anna Ritz
Quantitative time-resolved phosphoproteomic analysis of mast cell signaling
L Cao, K Yu, C Banh, V Nguyen, A Ritz, BJ Raphael, Y Kawakami, ...
The Journal of Immunology 179 (9), 5864-5876, 2007
Characterization of structural variants with single molecule and hybrid sequencing approaches
A Ritz, A Bashir, S Sindi, D Hsu, I Hajirasouliha, BJ Raphael
Bioinformatics 30 (24), 3458-3466, 2014
A new approach for quantitative phosphoproteomic dissection of signaling pathways applied to T cell receptor activation
V Nguyen, L Cao, JT Lin, N Hung, A Ritz, K Yu, R Jianu, SP Ulin, ...
Molecular & cellular proteomics 8 (11), 2418-2431, 2009
Environmental chemistry through intelligent atmospheric data analysis
DS Gross, R Atlas, J Rzeszotarski, E Turetsky, J Christensen, S Benzaid, ...
Environmental Modelling & Software 25 (6), 760-769, 2010
Metabolic reprogramming ensures cancer cell survival despite oncogenic signaling blockade
H Lue, J Podolak, K Kolahi, L Cheng, S Rao, D Garg, CH Xue, JK Rantala, ...
Genes & development 31 (20), 2067-2084, 2017
Pathways on demand: automated reconstruction of human signaling networks
A Ritz, CL Poirel, AN Tegge, N Sharp, K Simmons, A Powell, SD Kale, ...
NPJ systems biology and applications 2 (1), 1-9, 2016
Reconstructing cancer genomes from paired-end sequencing data
L Oesper, A Ritz, SJ Aerni, R Drebin, BJ Raphael
BMC bioinformatics 13 (6), 1-13, 2012
Transforming the language of life: transformer neural networks for protein prediction tasks
A Nambiar, M Heflin, S Liu, S Maslov, M Hopkins, A Ritz
Proceedings of the 11th ACM International Conference on Bioinformatics …, 2020
Structural variation analysis with strobe reads
A Ritz, A Bashir, BJ Raphael
Bioinformatics 26 (10), 1291-1298, 2010
Discovery of phosphorylation motif mixtures in phosphoproteomics data
A Ritz, G Shakhnarovich, AR Salomon, BJ Raphael
Bioinformatics 25 (1), 14-21, 2009
Signaling hypergraphs
A Ritz, AN Tegge, H Kim, CL Poirel, TM Murali
Trends in biotechnology 32 (7), 356-362, 2014
Gremlin: an interactive visualization model for analyzing genomic rearrangements
T O'Brien, A Ritz, B Raphael, D Laidlaw
IEEE transactions on visualization and computer graphics 16 (6), 918-926, 2010
Pathway analysis with signaling hypergraphs
A Ritz, TM Murali
Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014
Detection of recurrent rearrangement breakpoints from copy number data
A Ritz, PL Paris, MM Ittmann, C Collins, BJ Raphael
BMC bioinformatics 12 (1), 1-15, 2011
Quantitative phosphoproteomics reveals SLP-76 dependent regulation of PAG and Src family kinases in T cells
L Cao, Y Ding, N Hung, K Yu, A Ritz, BJ Raphael, AR Salomon
Public Library of Science 7 (10), e46725, 2012
Adapting k-medians to generate normalized cluster centers
BJ Anderson, DS Gross, DR Musicant, AM Ritz, TG Smith, LE Steinberg
Proceedings of the 2006 SIAM International Conference on Data Mining, 165-175, 2006
Differentially private anova testing
Z Campbell, A Bray, A Ritz, A Groce
2018 1st International Conference on Data Intelligence and Security (ICDIS …, 2018
Distance measures for tumor evolutionary trees
Z DiNardo, K Tomlinson, A Ritz, L Oesper
Bioinformatics 36 (7), 2090-2097, 2020
GraphSpace: stimulating interdisciplinary collaborations in network biology
A Bharadwaj, DP Singh, A Ritz, AN Tegge, CL Poirel, P Kraikivski, ...
Bioinformatics 33 (19), 3134-3136, 2017
MsPAC: a tool for haplotype-phased structural variant detection
OL Rodriguez, A Ritz, AJ Sharp, A Bashir
Bioinformatics 36 (3), 922-924, 2020
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