AMBER 2015 DA Case, J Berryman, RM Betz, DS Cerutti, TE Cheatham Iii, TA Darden, ... University of California, 2015 | 3470 | 2015 |
Evaluation of acridine orange, LysoTracker Red, and quinacrine as fluorescent probes for long‐term tracking of acidic vesicles A Pierzyńska‐Mach, PA Janowski, JW Dobrucki Cytometry Part A 85 (8), 729-737, 2014 | 257 | 2014 |
AMBER 14; University of California: San Francisco, 2014 DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Google Scholar There is no corresponding record for this reference, 1-826, 2014 | 229 | 2014 |
The FF14SB force field DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Amber 14, 29-31, 2014 | 216 | 2014 |
AmberTools 16 DA Case, RM Betz, W Botello-Smith, DS Cerutti, TE Cheatham III, ... University of California, San Francisco, 2016 | 114 | 2016 |
AMBER; University of California: San Francisco, 2018 DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... Google Scholar There is no corresponding record for this reference, 0 | 86 | |
Rationale for the real‐time and dynamic cell death assays using propidium iodide H Zhao, J Oczos, P Janowski, D Trembecka, J Dobrucki, Z Darzynkiewicz, ... Cytometry Part A: The Journal of the International Society for Advancement …, 2010 | 58 | 2010 |
AMBER 2016 RE Duke, TJ Giese, H Gohlke, AW Goetz, N Homeyer, S Izadi, P Janowski, ... University of California, San Francisco 1 (3), 2016 | 56 | 2016 |
Molecular dynamics simulation of triclinic lysozyme in a crystal lattice PA Janowski, C Liu, J Deckman, DA Case Protein science 25 (1), 87-102, 2016 | 50 | 2016 |
Peptide crystal simulations reveal hidden dynamics PA Janowski, DS Cerutti, J Holton, DA Case Journal of the American Chemical Society 135 (21), 7938-7948, 2013 | 46 | 2013 |
Evidence for the role of active site residues in the hairpin ribozyme from molecular simulations along the reaction path H Heldenbrand, PA Janowski, G Giambaşu, TJ Giese, JE Wedekind, ... Journal of the American Chemical Society 136 (22), 7789-7792, 2014 | 37 | 2014 |
Improved ligand geometries in crystallographic refinement using AFITT in PHENIX PA Janowski, NW Moriarty, BP Kelley, DA Case, DM York, PD Adams, ... Acta Crystallographica Section D: Structural Biology 72 (9), 1062-1072, 2016 | 28 | 2016 |
Walker DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ... Wang, J, 18 | 25 | 18 |
All-atom crystal simulations of DNA and RNA duplexes C Liu, PA Janowski, DA Case Biochimica et Biophysica Acta (BBA)-General Subjects 1850 (5), 1059-1071, 2015 | 24 | 2015 |
Improved chemistry restraints for crystallographic refinement by integrating the Amber force field into Phenix NW Moriarty, PA Janowski, JM Swails, H Nguyen, JS Richardson, ... Acta Crystallographica Section D: Structural Biology 76 (1), 51-62, 2020 | 23 | 2020 |
ParmEd J Swails, C Hernandez, DL Mobley, H Nguyen, LP Wang, P Janowski URL: https://github. com/ParmEd/ParmEd, 2010 | 21 | 2010 |
ParmEd: Cross-program parameter and topology file editor and molecular mechanical simulator engine J Swails, C Hernandez, D Mobley, H Nguyen, L Wang, P Janowski Available at parmed. github. io/ParmEd/html/index. html. Accessed December 5, 2016 | 9 | 2016 |
ParmEd; 2010 J Swails, C Hernandez, DL Mobley, H Nguyen, LP Wang, P Janowski Google Scholar There is no corresponding record for this reference, 0 | 6 | |
A/B testing at scale: Accelerating software innovation S Gupta, R Kohavi, A Deng, J Omhover, P Janowski Companion Proceedings of The 2019 World Wide Web Conference, 1299-1300, 2019 | 4 | 2019 |
Enterprise-level controlled experiments at scale: Challenges and solutions S Liu, A Fabijan, M Furchtgott, S Gupta, P Janowski, W Qin, P Dmitriev 2019 45th Euromicro Conference on Software Engineering and Advanced …, 2019 | 3 | 2019 |