End-to-end learning of multiple sequence alignments with differentiable Smith–Waterman S Petti, N Bhattacharya, R Rao, J Dauparas, N Thomas, J Zhou, AM Rush, ... Bioinformatics 39 (1), btac724, 2023 | 34 | 2023 |
Differential privacy in the 2020 US census: what will it do? Quantifying the accuracy/privacy tradeoff S Petti, A Flaxman Gates open research 3, 1722, 2020 | 22 | 2020 |
Bounds on übercrossing and petal numbers for knots C Adams, O Capovilla-Searle, J Freeman, D Irvine, S Petti, D Vitek, ... Journal of Knot Theory and Its Ramifications 24 (02), 1550012, 2015 | 19 | 2015 |
A space of phylogenetic networks SL Devadoss, S Petti SIAM Journal on Applied Algebra and Geometry 1 (1), 683-705, 2017 | 17 | 2017 |
Constructing benchmark test sets for biological sequence analysis using independent set algorithms S Petti, SR Eddy PLOS Computational Biology 18 (3), e1009492, 2022 | 15 | 2022 |
Correlation decay for hard spheres via Markov chains T Helmuth, W Perkins, S Petti The Annals of Applied Probability 32 (3), 2063-2082, 2022 | 14 | 2022 |
Multi-crossing number for knots and the Kauffman bracket polynomial C Adams, O Capovilla-Searle, J Freeman, D Irvine, S Petti, D Vitek, ... Mathematical Proceedings of the Cambridge Philosophical Society 164 (1), 147-178, 2018 | 12 | 2018 |
Approximating sparse graphs: The random overlapping communities model S Petti, SS Vempala Random Structures & Algorithms 61 (4), 844-908, 2022 | 10* | 2022 |
A large deviation principle for block models C Borgs, J Chayes, J Gaudio, S Petti, S Sen arXiv preprint arXiv:2007.14508, 2020 | 10 | 2020 |
Inferring sparse structure in genotype–phenotype maps S Petti, G Reddy, MM Desai Genetics 225 (1), iyad127, 2023 | 5 | 2023 |
SWAMPNN: End-to-end protein structures alignment J Trinquier, S Petti, S Feng, J Söding, M Steinegger, S Ovchinnikov Machine Learning for Structural Biology Workshop, NeurIPS, 2022 | 3 | 2022 |
Thresholds in random motif graphs M Anastos, P Michaeli, S Petti arXiv preprint arXiv:1907.12043, 2019 | 3 | 2019 |
Balanced allocation through random walk A Frieze, S Petti Information Processing Letters 131, 39-43, 2018 | 3 | 2018 |
The cover time of a biased random walk on Gn,p C Cooper, A Frieze, S Petti 2018 Proceedings of the Fifteenth Workshop on Analytic Algorithmics and …, 2018 | 3 | 2018 |
Cortical computation via iterative constructions C Papadimitriou, S Petti, S Vempala Conference on Learning Theory, 1357-1375, 2016 | 2 | 2016 |
Randomness as a Tool for Modeling and Uncovering Structure S Petti PhD thesis, Georgia Institute of Technology, 2020 | 1 | 2020 |