Olof Emanuelsson
Olof Emanuelsson
Associate professor, Royal Institute of Technology (KTH), Stockholm
Verified email at
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
O Emanuelsson, H Nielsen, S Brunak, G Von Heijne
Journal of molecular biology 300 (4), 1005-1016, 2000
Locating proteins in the cell using TargetP, SignalP and related tools
O Emanuelsson, S Brunak, G Von Heijne, H Nielsen
Nature protocols 2 (4), 953-971, 2007
ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
O Emanuelsson, H Nielsen, G Von Heijne
Protein Science 8 (5), 978-984, 1999
What is a gene, post-ENCODE? History and updated definition
MB Gerstein, C Bruce, JS Rozowsky, D Zheng, J Du, JO Korbel, ...
Genome research 17 (6), 669-681, 2007
Sorting signals, N-terminal modifications and abundance of the chloroplast proteome
B Zybailov, H Rutschow, G Friso, A Rudella, O Emanuelsson, Q Sun, ...
PloS one 3 (4), e1994, 2008
Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction
JB Peltier, O Emanuelsson, DE Kalume, J Ytterberg, G Friso, A Rudella, ...
The Plant Cell 14 (1), 211-236, 2002
Detecting sequence signals in targeting peptides using deep learning
JJA Armenteros, M Salvatore, O Emanuelsson, O Winther, G Von Heijne, ...
Life science alliance 2 (5), 2019
Prediction of organellar targeting signals
O Emanuelsson, G von Heijne
Biochimica et Biophysica Acta (BBA)-Molecular Cell Research 1541 (1-2), 114-119, 2001
Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array-and sequencing-based technologies
GM Euskirchen, JS Rozowsky, CL Wei, WH Lee, ZD Zhang, S Hartman, ...
Genome research 17 (6), 898-909, 2007
DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states
EJ White, O Emanuelsson, D Scalzo, T Royce, S Kosak, EJ Oakeley, ...
Proceedings of the National Academy of Sciences 101 (51), 17771-17776, 2004
In silico prediction of the peroxisomal proteome in fungi, plants and animals
O Emanuelsson, A Elofsson, G Von Heijne, S Cristobal
Journal of molecular biology 330 (2), 443-456, 2003
Sequencing degraded RNA addressed by 3'tag counting
B Sigurgeirsson, O Emanuelsson, J Lundeberg
PloS one 9 (3), e91851, 2014
Predicting protein subcellular localisation from amino acid sequence information
O Emanuelsson
Briefings in bioinformatics 3 (4), 361-376, 2002
Analysis of curated and predicted plastid subproteomes of Arabidopsis. Subcellular compartmentalization leads to distinctive proteome properties
Q Sun, O Emanuelsson, KJ van Wijk
Plant physiology 135 (2), 723-734, 2004
Hereditary uveal melanoma: A report of a germline mutation in BAP1
V Höiom, D Edsgärd, H Helgadottir, H Eriksson, C All‐Ericsson, ...
Genes, Chromosomes and Cancer 52 (4), 378-384, 2013
Design optimization methods for genomic DNA tiling arrays
P Bertone, V Trifonov, JS Rozowsky, F Schubert, O Emanuelsson, J Karro, ...
Genome research 16 (2), 271-281, 2006
Analysis and prediction of mitochondrial targeting peptides
O Emanuelsson, G von Heijne, G Schneider
Methods in cell biology 65, 175-187, 2001
GeneiASE: Detection of condition-dependent and static allele-specific expression from RNA-seq data without haplotype information
D Edsgärd, MJ Iglesias, SJ Reilly, A Hamsten, P Tornvall, J Odeberg, ...
Scientific reports 6 (1), 1-13, 2016
Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome
O Emanuelsson, U Nagalakshmi, D Zheng, JS Rozowsky, AE Urban, J Du, ...
Genome research 17 (6), 886-897, 2007
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