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Cefa Karabağ
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Year
Texture segmentation: An objective comparison between five traditional algorithms and a deep-learning U-Net architecture
C Karabağ, J Verhoeven, NR Miller, CC Reyes-Aldasoro
Applied Sciences 9 (18), 3900, 2019
262019
Classification and visualisation of normal and abnormal radiographs; a comparison between eleven convolutional neural network architectures
A Ananda, KH Ngan, C Karabağ, A Ter-Sarkisov, E Alonso, ...
Sensors 21 (16), 5381, 2021
242021
Segmentation and modelling of the nuclear envelope of hela cells imaged with serial block face scanning electron microscopy
C Karabağ, ML Jones, CJ Peddie, AE Weston, LM Collinson, ...
Journal of Imaging 5 (9), 75, 2019
202019
Semantic Segmentation of HeLa Cells: An Objective Comparison between one Traditional Algorithm and Three Deep-Learning Architectures
LMCCCRA Cefa Karabağ, Martin L Jones, Christopher J Peddie, Anne E Weston
bioRxiv 978478, 2020
19*2020
Volumetric semantic instance segmentation of the plasma membrane of hela cells
C Karabağ, ML Jones, CC Reyes-Aldasoro
Journal of Imaging 7 (6), 93, 2021
72021
Radiography classification: A comparison between eleven convolutional neural networks
C Karabağ, A Ter-Sarkisov, E Alonso, CC Reyes-Aldasoro
2020 Fourth International Conference on Multimedia Computing, Networking and …, 2020
72020
Automated Segmentation of HeLa Nuclear Envelope from Electron Microscopy Images
C Karabağ, ML Jones, CJ Peddie, AE Weston, LM Collinson, ...
Medical Image Understanding and Analysis: 22nd Conference, MIUA 2018 …, 2018
72018
Morphological estimation of cellularity on neo-adjuvant treated breast cancer histological images
MA Ortega-Ruiz, C Karabağ, VG Garduño, CC Reyes-Aldasoro
Journal of Imaging 6 (10), 101, 2020
62020
Impact of training data, ground truth and shape variability in the deep learning-based semantic segmentation of HeLa cells observed with electron microscopy
C Karabağ, MA Ortega-Ruíz, CC Reyes-Aldasoro
Journal of Imaging 9 (3), 59, 2023
52023
Texture segmentation: an objective comparison between traditional and deep-learning methodologies
C Karabag, J Verhoeven, NR Miller, CC Reyes-Aldasoro
Preprints, 2019
52019
DRD-UNet, a UNet-like architecture for multi-class breast cancer semantic segmentation
MA Ortega-Ruíz, C Karabağ, E Roman-Rangel, CC Reyes-Aldasoro
IEEE Access, 2024
22024
Segmentation And Modelling of Helanuclear Envelope
C Karabağ, ML Jones, CJ Peddie, AE Westor, LM Collinson, ...
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019
12019
Relationship between irregularities of the nuclear envelope and mitochondria in hela cells observed with electron microscopy
DA Brito-Pacheco, C Karabağ, C Brito-Loeza, P Giannopoulos, ...
bioRxiv, 2023.11. 14.567016, 2023
2023
Evaluation of training data, ground truth and shape variability in the semantic segmentation of HeLa cells observed with electron microscopy
C Karabağ, CC Reyes-Aldasoro
bioRxiv, 2022.06. 01.494316, 2022
2022
Estimation of cellularity in tumours treated with Neoadjuvant therapy: A comparison of Machine Learning algorithms
MA Ortega-Ruíz, C Karabağ, VG Garduño, CC Reyes-Aldasoro
bioRxiv, 2020.04. 09.034348, 2020
2020
Geometric differences between nuclear envelopes of Wild-type and Chlamydia trachomatis-infected HeLa cells
C Karabağ, ML Jones, CJ Peddie, AE Weston, LM Collinson, ...
bioRxiv, 2020.04. 02.021733, 2020
2020
Morphological estimation of Cellularity on Neo-adjuvant treated breast cancer histological images (10.1101/2020.04. 01.020719)
MA Ortega-Ruiz, C Karabağ, V García Garduño, CC Reyes-Aldasoro
This is the draft version of the paper. This version of the publication may …, 2020
2020
Volumetric analysis of HeLa cancer cells imaged with serial block face scanning electron microscopy
C Karabağ
City, University of London, 2020
2020
Modelling the nuclear envelope of HeLa cells
C Karabağ, ML Jones, CJ Peddie, AE Weston, LM Collinson, ...
bioRxiv, 344986, 2018
2018
Investigation of topological features of the 3D cellular nuclear envelope as observed with electron microscopy
K Dese, C Karabağ, P Giannopoulos, CC Reyes–Aldasoro
27th Conference on Medical Image Understanding and Analysis 2023, 221, 0
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