Application of T cell receptor (TCR) repertoire analysis for the advancement of cancer immunotherapy K Joshi, M Milighetti, BM Chain Current opinion in immunology 74, 1-8, 2022 | 30 | 2022 |
The proteomic landscape of soft tissue sarcomas J Burns, CP Wilding, L Krasny, X Zhu, M Chadha, YB Tam, H Ps, ... Nature Communications 14 (1), 3834, 2023 | 28 | 2023 |
Predicting T Cell Receptor Antigen Specificity From Structural Features Derived From Homology Models of Receptor-Peptide-Major Histocompatibility Complexes M Milighetti, J Shawe-Taylor, B Chain Frontiers in Physiology 12 (730908), 2021 | 23 | 2021 |
Proteomic profiling of soft tissue sarcomas with SWATH mass spectrometry M Milighetti, L Krasny, ATJ Lee, G Morani, C Szecsei, Y Chen, N Guljar, ... Journal of Proteomics 241, 104236, 2021 | 19 | 2021 |
Large clones of pre-existing T cells drive early immunity against SARS-COV-2 and LCMV infection M Milighetti, Y Peng, C Tan, M Mark, G Nageswaran, S Byrne, T Ronel, ... Iscience 26 (6), 2023 | 9 | 2023 |
Single-cell analysis of bronchoalveolar cells in inflammatory and fibrotic post-COVID lung disease P Mehta, B Sanz-Magallón Duque de Estrada, EK Denneny, K Foster, ... Frontiers in Immunology 15, 1372658, 2024 | 5 | 2024 |
Contrastive learning of T cell receptor representations Y Nagano, AGT Pyo, M Milighetti, J Henderson, J Shawe-Taylor, B Chain, ... Cell Systems 16 (1), 2025 | 4 | 2025 |
Limits on inferring T cell specificity from partial information J Henderson, Y Nagano, M Milighetti, A Tiffeau-Mayer Proceedings of the National Academy of Sciences 121 (42), e2408696121, 2024 | 4 | 2024 |
Intra-and inter-chain contacts determine TCR specificity: applying protein co-evolution methods to TCRαβ pairing M Milighetti, Y Nagano, J Henderson, U Hershberg, A Tiffeau-Mayer, ... bioRxiv, 2024.05. 24.595718, 2024 | 3 | 2024 |
IL-33-activated ILC2s induce tertiary lymphoid structures in pancreatic cancer M Amisaki, A Zebboudj, H Yano, SL Zhang, G Payne, AK Chandra, R Yu, ... Nature, 1-9, 2025 | 2 | 2025 |
Abstract PR-06: Personalized RNA neoantigen vaccines induce long-lived CD8+ T effector cells in pancreatic cancer P Guasp, Z Sethna, C Reiche, M Milighetti, N Ceglia, E Patterson, N Pang, ... Cancer Immunology Research 12 (10_Supplement), PR-06-PR-06, 2024 | 2 | 2024 |
Analysis of T cell receptor sequence and structure to understand the drivers of antigen specificity M Milighetti UCL (University College London), 2023 | 2 | 2023 |
RNA neoantigen vaccines prime long-lived CD8+ T cells in pancreatic cancer Z Sethna, P Guasp, C Reiche, M Milighetti, N Ceglia, E Patterson, J Lihm, ... Nature, 1-10, 2025 | 1 | 2025 |
DiffPaSS–Differentiable and scalable pairing of biological sequences using soft scores U Lupo, D Sgarbossa, M Milighetti, AF Bitbol ICLR 2024 Workshop on Generative and Experimental Perspectives for …, 2024 | 1 | 2024 |
S84 Single-cell landscape of bronchoalveolar cells in inflammatory and fibrotic post-COVID residual lung abnormalities P Mehta, BSMD de Estrada, E Denneny, K Foster, C Turner, A Meyer, ... Thorax 78 (Suppl 4), A61-A61, 2023 | 1 | 2023 |
Treg fitness signatures as a biomarker for disease activity in Juvenile Idiopathic Arthritis MH Attrill, D Shinko, TM Viveiros, M Milighetti, NM de Gruijter, B Jebson, ... Journal of Autoimmunity 152, 103379, 2025 | | 2025 |
Abstract B079: Interleukin-33 activated ILC2s induce tertiary lymphoid structures in pancreatic cancer A Zebboudj, M Amisaki, H Yano, SL Zhang, G Payne, AK Chandra, R Yu, ... Cancer Immunology Research 13 (2_Supplement), B079-B079, 2025 | | 2025 |
DiffPaSS—high-performance differentiable pairing of protein sequences using soft scores U Lupo, D Sgarbossa, M Milighetti, AF Bitbol Bioinformatics 41 (1), btae738, 2025 | | 2025 |
Data-driven Discovery of Biophysical T Cell Receptor Co-specificity Rules AGT Pyo, Y Nagano, M Milighetti, J Henderson, CG Callan Jr, B Chain, ... arXiv preprint arXiv:2412.13722, 2024 | | 2024 |
Treg fitness as a biomarker for disease activity in Juvenile Idiopathic Arthritis MH Attrill, D Shinko, TM Viveiros, M Milighetti, NM de Gruijter, B Jebson, ... bioRxiv, 2024.04. 24.590917, 2024 | | 2024 |