Prati
Lina Zheng
Lina Zheng
Potvrđena adresa e-pošte na ucsd.edu
Naslov
Citirano
Citirano
Godina
Constructing 3D interaction maps from 1D epigenomes
Y Zhu, Z Chen, K Zhang, M Wang, D Medovoy, JW Whitaker, B Ding, N Li, ...
Nature communications 7 (1), 10812, 2016
1472016
Normalization and noise reduction for single cell RNA-seq experiments
B Ding, L Zheng, Y Zhu, N Li, H Jia, R Ai, A Wildberg, W Wang
Bioinformatics 31 (13), 2225-2227, 2015
1172015
Assessing characteristics of RNA amplification methods for single cell RNA sequencing
HR Dueck, R Ai, A Camarena, B Ding, R Dominguez, OV Evgrafov, ...
BMC genomics 17, 1-22, 2016
402016
Identification of DNA motifs that regulate DNA methylation
M Wang, K Zhang, V Ngo, C Liu, S Fan, JW Whitaker, Y Chen, R Ai, ...
Nucleic Acids Research 47 (13), 6753-6768, 2019
352019
Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath
X Ren, M Wang, B Li, K Jamieson, L Zheng, IR Jones, B Li, MA Takagi, ...
Science advances 7 (38), eabi4360, 2021
192021
Systems-biology analysis of rheumatoid arthritis fibroblast-like synoviocytes implicates cell line-specific transcription factor function
RI Ainsworth, D Hammaker, G Nygaard, C Ansalone, C Machado, ...
Nature communications 13 (1), 6221, 2022
142022
Assessment of single cell RNA-seq normalization methods
B Ding, L Zheng, W Wang
G3: Genes, Genomes, Genetics 7 (7), 2039-2045, 2017
142017
Synthesis and in vitro evaluation of ambrisentan analogues as potential endothelin receptor antagonists
J Xia, J Song, L Zhen, X Zhang, X Lei, L Zheng, Q Wang, H Sun
Bioorganic & medicinal chemistry letters 21 (13), 3894-3897, 2011
122011
Noncoding loci without epigenomic signals can be essential for maintaining global chromatin organization and cell viability
B Ding, Y Liu, Z Liu, L Zheng, P Xu, Z Chen, P Wu, Y Zhao, Q Pan, Y Guo, ...
Science Advances 7 (45), eabi6020, 2021
82021
Constructing 3D interaction maps from 1D epigenomes. Nat Commun. 2016; 7: 10812
Y Zhu, Z Chen, K Zhang, M Wang, D Medovoy, JW Whitaker, B Ding, N Li, ...
8
Regulation associated modules reflect 3D genome modularity associated with chromatin activity
L Zheng, W Wang
Nature Communications 13 (1), 5281, 2022
12022
Regulatory elements can be essential for maintaining broad chromatin organization and cell viability
Y Liu, B Ding, L Zheng, P Xu, Z Liu, Z Chen, P Wu, Y Zhao, Q Pan, Y Guo, ...
Nucleic Acids Research 50 (8), 4340-4354, 2022
12022
Assessing the measurement transfer function of single-cell RNA sequencing
HR Dueck, R Ai, A Camarena, B Ding, R Dominguez, OV Evgrafov, ...
bioRxiv, 045450, 2016
12016
Functional characterization of gene regulatory elements and neuropsychiatric disease-associated risk loci in iPSCs and iPSC-derived neurons
X Yang, IR Jones, PB Chen, H Yang, X Ren, L Zheng, B Li, YE Li, Q Sun, ...
bioRxiv, 2023.08. 30.555359, 2023
2023
New insights into 3D chromatin organization and function
L Zheng
UC San Diego, 2022
2022
Rheumatoid Arthritis Patient-Specific Therapeutic Target Identification Using Integrative Epigenetic Profiling
R Ainsworth
2018 ACR/ARHP Annual Meeting, 2018
2018
Targeted mutations on 3D hub loci alter spatial interaction environment
B Ding, L Zheng, D Medovoy, W Wang
bioRxiv, 030999, 2015
2015
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Članci 1–17