Prati
Vineet Bafna
Vineet Bafna
Professor, Computer Science & Engineering, University of California, San Diego
Potvrđena adresa e-pošte na cs.ucsd.edu - Početna stranica
Naslov
Citirano
Citirano
Godina
The sequence of the human genome
JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, ...
science 291 (5507), 1304-1351, 2001
186282001
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
25602012
The diploid genome sequence of an individual human
S Levy, G Sutton, PC Ng, L Feuk, AL Halpern, BP Walenz, N Axelrod, ...
PLoS biology 5 (10), e254, 2007
21872007
The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families
S Yooseph, G Sutton, DB Rusch, AL Halpern, SJ Williamson, ...
PLoS biology 5 (3), e16, 2007
9792007
Human beta-defensin 2 is a salt-sensitive peptide antibiotic expressed in human lung.
R Bals, X Wang, Z Wu, T Freeman, V Bafna, M Zasloff, JM Wilson
The Journal of clinical investigation 102 (5), 874-880, 1998
7711998
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding
KJ McKernan, HE Peckham, GL Costa, SF McLaughlin, Y Fu, EF Tsung, ...
Genome research 19 (9), 1527-1541, 2009
7342009
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
7062016
The dog genome: survey sequencing and comparative analysis
EF Kirkness, V Bafna, AL Halpern, S Levy, K Remington, DB Rusch, ...
Science 301 (5641), 1898-1903, 2003
6912003
InsPecT: identification of posttranslationally modified peptides from tandem mass spectra
S Tanner, H Shu, A Frank, LC Wang, E Zandi, M Mumby, PA Pevzner, ...
Analytical chemistry 77 (14), 4626-4639, 2005
6882005
Genome rearrangements and sorting by reversals
V Bafna, PA Pevzner
SIAM Journal on computing 25 (2), 272-289, 1996
6841996
De novo somatic mutations in components of the PI3K-AKT3-mTOR pathway cause hemimegalencephaly
JH Lee, M Huynh, JL Silhavy, S Kim, T Dixon-Salazar, A Heiberg, E Scott, ...
Nature genetics 44 (8), 941-945, 2012
6152012
A multidimensional chromatography technology for in-depth phosphoproteome analysis
CP Albuquerque, MB Smolka, SH Payne, V Bafna, J Eng, H Zhou
Molecular & Cellular Proteomics 7 (7), 1389-1396, 2008
5982008
Sorting by transpositions
V Bafna, PA Pevzner
SIAM Journal on Discrete Mathematics 11 (2), 224-240, 1998
5621998
Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
GC Hon, RD Hawkins, OL Caballero, C Lo, R Lister, M Pelizzola, ...
Genome research 22 (2), 246-258, 2012
5032012
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 1235587, 2013
4012013
Extrachromosomal oncogene amplification drives tumour evolution and genetic heterogeneity
KM Turner, V Deshpande, D Beyter, T Koga, J Rusert, C Lee, B Li, ...
Nature 543 (7643), 122-125, 2017
4002017
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 1-9, 2014
3682014
A 2-approximation algorithm for the undirected feedback vertex set problem
V Bafna, P Berman, T Fujito
SIAM Journal on Discrete Mathematics 12 (3), 289-297, 1999
3551999
Identification of post-translational modifications via blind search of mass-spectra
D Tsur, S Tanner, E Zandi, V Bafna, PA Pevzner
2005 IEEE Computational Systems Bioinformatics Conference (CSB'05), 157-166, 2005
3542005
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem
V Bansal, V Bafna
Bioinformatics 24 (16), i153-i159, 2008
3232008
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