John Matese
John Matese
Bioinformatics, Princeton University
Potvrđena adresa e-pošte na Princeton.EDU
Gene ontology: tool for the unification of biology
M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, ...
Nature genetics 25 (1), 25-29, 2000
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
T Sørlie, CM Perou, R Tibshirani, T Aas, S Geisler, H Johnsen, T Hastie, ...
Proceedings of the National Academy of Sciences 98 (19), 10869-10874, 2001
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ...
Nature genetics 29 (4), 365-371, 2001
Identification of genes periodically expressed in the human cell cycle and their expression in tumors
ML Whitfield, G Sherlock, AJ Saldanha, JI Murray, CA Ball, KE Alexander, ...
Molecular biology of the cell 13 (6), 1977-2000, 2002
Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast
MJ Brauer, C Huttenhower, EM Airoldi, R Rosenstein, JC Matese, ...
Molecular biology of the cell 19 (1), 352-367, 2008
The stanford microarray database
G Sherlock, T Hernandez-Boussard, A Kasarskis, G Binkley, JC Matese, ...
Nucleic acids research 29 (1), 152-155, 2001
SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data
M Diehn, G Sherlock, G Binkley, H Jin, JC Matese, ...
Nucleic acids research 31 (1), 219-223, 2003
The Stanford Microarray Database: data access and quality assessment tools
J Gollub, CA Ball, G Binkley, J Demeter, DB Finkelstein, JM Hebert, ...
Nucleic Acids Research 31 (1), 94-96, 2003
Transcriptional programs activated by exposure of human prostate cancer cells to androgen
SE DePrimo, M Diehn, JB Nelson, RE Reiter, J Matese, M Fero, ...
Genome biology 3 (7), 1-12, 2002
The Stanford Microarray Database accommodates additional microarray platforms and data formats
CA Ball, IAB Awad, J Demeter, J Gollub, JM Hebert, ...
Nucleic Acids Research 33 (suppl_1), D580-D582, 2005
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, ...
Nat Genet 25 (1), 2529, 2000
The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome with 16,000 Tiny Chromosomes
EC Swart, JR Bracht, V Magrini, P Minx, X Chen, Y Zhou, JS Khurana, ...
PLoS biology 11 (1), e1001473, 2013
The Stanford Microarray Database: implementation of new analysis tools and open source release of software
J Demeter, C Beauheim, J Gollub, T Hernandez-Boussard, H Jin, D Maier, ...
Nucleic acids research 35 (suppl_1), D766-D770, 2007
Comprehensive single-cell transcriptome lineages of a proto-vertebrate
C Cao, LA Lemaire, W Wang, PH Yoon, YA Choi, LR Parsons, JC Matese, ...
Nature 571 (7765), 349-354, 2019
Submission of microarray data to public repositories
CA Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, ...
PLoS biology 2 (9), e317, 2004
& Sherlock, G.(2000). Gene Ontology: tool for the unification of biology
M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, ...
Nature genetics 25 (1), 25-29, 0
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data
CA Ball, H Jin, G Sherlock, S Weng, JC Matese, R Andrada, G Binkley, ...
Nucleic acids research 29 (1), 80-81, 2001
Comparative Genomic Hybridizations of Entamoeba Strains Reveal Unique Genetic Fingerprints That Correlate with Virulence
PH Shah, RC MacFarlane, D Bhattacharya, JC Matese, J Demeter, ...
Eukaryotic Cell 4 (3), 504-515, 2005
Regulated exocytosis and sequential construction of the extracellular matrix surrounding the sea urchin zygote
JC Matese, S Black, DR McClay
Developmental biology 186 (1), 16-26, 1997
GeneXplorer: an interactive web application for microarray data visualization and analysis
CA Rees, J Demeter, JC Matese, D Botstein, G Sherlock
BMC bioinformatics 5 (1), 1-7, 2004
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