| Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ... Science 330 (6012), 1787-1797, 2010 | 1006 | 2010 |
| The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote D Schübeler, DM MacAlpine, D Scalzo, C Wirbelauer, C Kooperberg, ... Genes & development 18 (11), 1263-1271, 2004 | 972 | 2004 |
| Unlocking the secrets of the genome SE Celniker, LAL Dillon, MB Gerstein, KC Gunsalus, S Henikoff, ... Nature 459 (7249), 927-930, 2009 | 929 | 2009 |
| Comprehensive analysis of the chromatin landscape in Drosophila melanogaster PV Kharchenko, AA Alekseyenko, YB Schwartz, A Minoda, NC Riddle, ... Nature 471 (7339), 480-485, 2011 | 913 | 2011 |
| A cis-regulatory map of the Drosophila genome N Nègre, CD Brown, L Ma, CA Bristow, SW Miller, U Wagner, ... Nature 471 (7339), 527-531, 2011 | 543 | 2011 |
| Conserved nucleosome positioning defines replication origins ML Eaton, K Galani, S Kang, SP Bell, DM MacAlpine Genes & development 24 (8), 748-753, 2010 | 389 | 2010 |
| Comparative analysis of metazoan chromatin organization JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ... Nature 512 (7515), 449-452, 2014 | 374 | 2014 |
| Coordination of replication and transcription along a Drosophila chromosome DM MacAlpine, HK Rodríguez, SP Bell Genes & development 18 (24), 3094-3105, 2004 | 364 | 2004 |
| Epigenome characterization at single base-pair resolution JG Henikoff, JA Belsky, K Krassovsky, DM MacAlpine, S Henikoff Proceedings of the National Academy of Sciences 108 (45), 18318-18323, 2011 | 319 | 2011 |
| Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading HK MacAlpine, R Gordân, SK Powell, AJ Hartemink, DM MacAlpine Genome research 20 (2), 201-211, 2010 | 308 | 2010 |
| Co-orientation of replication and transcription preserves genome integrity A Srivatsan, A Tehranchi, DM MacAlpine, JD Wang PLoS genetics 6 (1), e1000810, 2010 | 202 | 2010 |
| Chromatin signatures of the Drosophila replication program ML Eaton, JA Prinz, HK MacAlpine, G Tretyakov, PV Kharchenko, ... Genome research 21 (2), 164-174, 2011 | 199 | 2011 |
| Chromatin and DNA replication DM MacAlpine, G Almouzni Cold Spring Harbor perspectives in biology 5 (8), a010207, 2013 | 189 | 2013 |
| Genomic profiling and expression studies reveal both positive and negative activities for the Drosophila Myb–MuvB/dREAM complex in proliferating cells D Georlette, S Ahn, DM MacAlpine, E Cheung, PW Lewis, EL Beall, ... Genes & development 21 (22), 2880-2896, 2007 | 171 | 2007 |
| Expression in Aneuploid Drosophila S2 Cells Y Zhang, JH Malone, SK Powell, V Periwal, E Spana, DM MacAlpine, ... PLoS biology 8 (2), e1000320, 2010 | 170 | 2010 |
| Localized H3K36 methylation states define histone H4K16 acetylation during transcriptional elongation in Drosophila O Bell, C Wirbelauer, M Hild, AND Scharf, M Schwaiger, DM MacAlpine, ... The EMBO journal 26 (24), 4974-4984, 2007 | 162 | 2007 |
| DNA replication origins—where do we begin? MN Prioleau, DM MacAlpine Genes & development 30 (15), 1683-1697, 2016 | 154 | 2016 |
| Rare codons regulate KRas oncogenesis BL Lampson, NLK Pershing, JA Prinz, JR Lacsina, WF Marzluff, ... Current Biology 23 (1), 70-75, 2013 | 150 | 2013 |
| Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition SA Lujan, AR Clausen, AB Clark, HK MacAlpine, DM MacAlpine, EP Malc, ... Genome research 24 (11), 1751-1764, 2014 | 146 | 2014 |
| A genomic view of eukaryotic DNA replication DM MacAlpine, SP Bell Chromosome Research 13, 309-326, 2005 | 139 | 2005 |
