Pavlo Lutsik
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Comprehensive analysis of DNA methylation data with RnBeads
Y Assenov, F Müller, P Lutsik, J Walter, T Lengauer, C Bock
Nature methods 11 (11), 1138-1140, 2014
Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories
C Gerhauser, F Favero, T Risch, R Simon, L Feuerbach, Y Assenov, ...
Cancer Cell 34 (6), 996-1011. e8, 2018
DNA methylation analysis on purified neurons and glia dissects age and Alzheimer’s disease-specific changes in the human cortex
G Gasparoni, S Bultmann, P Lutsik, TFJ Kraus, S Sordon, J Vlcek, ...
Epigenetics & chromatin 11 (1), 1-19, 2018
Assisted reproductive technologies do not enhance the variability of DNA methylation imprints in human
S Tierling, NY Souren, J Gries, C LoPorto, M Groth, P Lutsik, H Neitzel, ...
Journal of medical genetics 47 (6), 371-376, 2010
RnBeads 2.0: comprehensive analysis of DNA methylation data
F Müller, M Scherer, Y Assenov, P Lutsik, J Walter, T Lengauer, C Bock
Genome biology 20 (1), 1-12, 2019
BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing
P Lutsik, L Feuerbach, J Arand, T Lengauer, J Walter, C Bock
Nucleic acids research 39 (suppl_2), W551-W556, 2011
Enhancer hijacking activates oncogenic transcription factor NR4A3 in acinic cell carcinomas of the salivary glands
F Haller, M Bieg, R Will, C Körner, D Weichenhan, A Bott, N Ishaque, ...
Nature communications 10 (1), 1-13, 2019
MeDeCom: discovery and quantification of latent components of heterogeneous methylomes
P Lutsik, M Slawski, G Gasparoni, N Vedeneev, M Hein, J Walter
Genome biology 18 (1), 1-20, 2017
Integrative analysis defines distinct prognostic subgroups of intrahepatic cholangiocarcinoma
B Goeppert, R Toth, S Singer, T Albrecht, DB Lipka, P Lutsik, D Brocks, ...
Hepatology 69 (5), 2091-2106, 2019
Adult monozygotic twins discordant for intra-uterine growth have indistinguishable genome-wide DNA methylation profiles
NYP Souren, P Lutsik, G Gasparoni, S Tierling, J Gries, ...
Genome biology 14 (5), 1-15, 2013
Matrix factorization with binary components
M Slawski, M Hein, P Lutsik
Advances in neural information processing systems 26, 2013
DNA methylation signatures of monozygotic twins clinically discordant for multiple sclerosis
NY Souren, LA Gerdes, P Lutsik, G Gasparoni, E Beltrán, A Salhab, ...
Nature communications 10 (1), 1-12, 2019
Epigenome data release: a participant-centered approach to privacy protection
SOM Dyke, WA Cheung, Y Joly, O Ammerpohl, P Lutsik, MA Rothstein, ...
Genome biology 16 (1), 1-12, 2015
Bi-PROF: bisulfite profiling of target regions using 454 GS FLX Titanium technology
J Gries, D Schumacher, J Arand, P Lutsik, MR Markelova, I Fichtner, ...
Epigenetics 8 (7), 765-771, 2013
Neuronal ensemble-specific DNA methylation strengthens engram stability
K Gulmez Karaca, J Kupke, DVC Brito, B Zeuch, C Thome, D Weichenhan, ...
Nature communications 11 (1), 1-13, 2020
Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software
C Decamps, F Privé, R Bacher, D Jost, A Waguet, EA Houseman, E Lurie, ...
BMC bioinformatics 21 (1), 1-15, 2020
BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives
D Becker, P Lutsik, P Ebert, C Bock, T Lengauer, J Walter
Nucleic acids research 42 (W1), W501-W507, 2014
Globally altered epigenetic landscape and delayed osteogenic differentiation in H3. 3-G34W-mutant giant cell tumor of bone
P Lutsik, A Baude, D Mancarella, S Öz, A Kühn, R Toth, J Hey, UH Toprak, ...
Nature communications 11 (1), 1-16, 2020
Mitochondrial DNA variation and heteroplasmy in monozygotic twins clinically discordant for multiple sclerosis
NYP Souren, LA Gerdes, T Kümpfel, P Lutsik, T Klopstock, R Hohlfeld, ...
Human mutation 37 (8), 765-775, 2016
Methylome-based cell-of-origin modeling (Methyl-COOM) identifies aberrant expression of immune regulatory molecules in CLL
JA Wierzbinska, R Toth, N Ishaque, K Rippe, JP Mallm, LC Klett, ...
Genome medicine 12 (1), 1-19, 2020
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