| SignaLink 2–a signaling pathway resource with multi-layered regulatory networks D Fazekas, M Koltai, D Türei, D Módos, M Pálfy, Z Dúl, L Zsákai, ... BMC systems biology 7, 1-15, 2013 | 228 | 2013 |
| ComPPI: a cellular compartment-specific database for protein–protein interaction network analysis DV Veres, DM Gyurkó, B Thaler, KZ Szalay, D Fazekas, T Korcsmáros, ... Nucleic acids research 43 (D1), D485-D493, 2015 | 140 | 2015 |
| The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops D Papp, K Lenti, D Módos, D Fazekas, Z Dúl, D Türei, L Földvári-Nagy, ... FEBS letters 586 (13), 1795-1802, 2012 | 133 | 2012 |
| Uniformly curated signaling pathways reveal tissue-specific cross-talks and support drug target discovery T Korcsmáros, IJ Farkas, MS Szalay, P Rovó, D Fazekas, Z Spiró, C Böde, ... Bioinformatics 26 (16), 2042-2050, 2010 | 101 | 2010 |
| Autophagy Regulatory Network—A systems-level bioinformatics resource for studying the mechanism and regulation of autophagy D Türei, L Földvári-Nagy, D Fazekas, D Módos, J Kubisch, T Kadlecsik, ... Autophagy 11 (1), 155-165, 2015 | 98 | 2015 |
| HSF1Base: a comprehensive database of HSF1 (heat shock factor 1) target genes D Kovács, T Sigmond, B Hotzi, B Bohár, D Fazekas, V Deák, T Vellai, ... International Journal of Molecular Sciences 20 (22), 5815, 2019 | 76 | 2019 |
| NRF2‐ome: An Integrated Web Resource to Discover Protein Interaction and Regulatory Networks of NRF2 D Türei, D Papp, D Fazekas, L Földvári-Nagy, D Módos, K Lenti, ... Oxidative medicine and cellular longevity 2013 (1), 737591, 2013 | 54 | 2013 |
| TFLink: an integrated gateway to access transcription factor–target gene interactions for multiple species O Liska, B Bohár, A Hidas, T Korcsmáros, B Papp, D Fazekas, E Ari Database 2022, baac083, 2022 | 52 | 2022 |
| Neighbours of cancer-related proteins have key influence on pathogenesis and could increase the drug target space for anticancer therapies D Módos, KC Bulusu, D Fazekas, J Kubisch, J Brooks, I Marczell, ... NPJ systems biology and applications 3 (1), 2, 2017 | 34 | 2017 |
| CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination L Perfetto, ML Acencio, G Bradley, G Cesareni, N Del Toro, D Fazekas, ... Bioinformatics 35 (19), 3779-3785, 2019 | 32 | 2019 |
| Signalogs: orthology-based identification of novel signaling pathway components in three metazoans T Korcsmáros, MS Szalay, P Rovó, R Palotai, D Fazekas, K Lenti, ... PLoS One 6 (5), e19240, 2011 | 31 | 2011 |
| SalmoNet, an integrated network of ten Salmonella enterica strains reveals common and distinct pathways to host adaptation A Métris, P Sudhakar, D Fazekas, A Demeter, E Ari, M Olbei, P Branchu, ... NPJ systems biology and applications 3 (1), 31, 2017 | 30 | 2017 |
| SignaLink3: a multi-layered resource to uncover tissue-specific signaling networks L Csabai, D Fazekas, T Kadlecsik, M Szalay-Bekő, B Bohár, M Madgwick, ... Nucleic acids research 50 (D1), D701-D709, 2022 | 25 | 2022 |
| SignaLink: multilayered regulatory networks L Csabai, M Ölbei, A Budd, T Korcsmáros, D Fazekas Computational Cell Biology: Methods and Protocols, 53-73, 2018 | 18 | 2018 |
| A systems genomics approach to uncover patient-specific pathogenic pathways and proteins in ulcerative colitis J Brooks-Warburton, D Modos, P Sudhakar, M Madgwick, JP Thomas, ... Nature Communications 13 (1), 2299, 2022 | 15 | 2022 |
| Identification of critical paralog groups with indispensable roles in the regulation of signaling flow D Modos, J Brooks, D Fazekas, E Ari, T Vellai, P Csermely, T Korcsmaros, ... Scientific reports 6 (1), 38588, 2016 | 10 | 2016 |
| The gene regulation knowledge commons: the action area of GREEKC M Kuiper, J Bonello, JT Fernández-Breis, P Bucher, ME Futschik, ... Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1865 (1), 194768, 2022 | 6 | 2022 |
| SignaFish: a zebrafish-specific signaling pathway resource K Csályi, D Fazekas, T Kadlecsik, D Türei, L Gul, B Horváth, D Módos, ... Zebrafish 13 (6), 541-544, 2016 | 5 | 2016 |
| AutophagyNet: high-resolution data source for the analysis of autophagy and its regulation L Csabai, B Bohár, D Türei, S Prabhu, L Földvári-Nagy, M Madgwick, ... Autophagy 20 (1), 188-201, 2024 | 3 | 2024 |
| Sherlock: an open-source data platform to store, analyze and integrate Big Data for computational biologists B Bohar, D Fazekas, M Madgwick, L Csabai, M Olbei, T Korcsmáros, ... F1000Research 10, 2021 | 3 | 2021 |
Tamas KorcsmarosImperial College LondonVerified email at imperial.ac.uk
