Andreas R Pfenning
Andreas R Pfenning
Assistant Professor, Carnegie Mellon University
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Cited by
Cited by
Integrative analysis of 111 reference human epigenomes
Roadmap Epigenomics Consortium Integrative analysis coordination Kundaje ...
Nature 518 (7539), 317-330, 2015
Comparative genomics reveals insights into avian genome evolution and adaptation
G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ...
Science 346 (6215), 1311-1320, 2014
The genome of a songbird
WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ...
Nature 464 (7289), 757-762, 2010
Integrative analysis of 111 reference human epigenomes
CR Epigenomics, A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, ...
Nature 518 (7539), 317-330, 2015
Activity-induced DNA breaks govern the expression of neuronal early-response genes
R Madabhushi, F Gao, AR Pfenning, L Pan, S Yamakawa, J Seo, ...
Cell 161 (7), 1592-1605, 2015
Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease
E Gjoneska, AR Pfenning, H Mathys, G Quon, A Kundaje, LH Tsai, ...
Nature 518 (7539), 365-369, 2015
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates
J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ...
Proceedings of the National Academy of Sciences 117 (36), 22311-22322, 2020
Convergent transcriptional specializations in the brains of humans and song-learning birds
AR Pfenning, E Hara, O Whitney, MV Rivas, R Wang, PL Roulhac, ...
Science 346 (6215), 1256846, 2014
Global view of the functional molecular organization of the avian cerebrum: mirror images and functional columns
ED Jarvis, J Yu, MV Rivas, H Horita, G Feenders, O Whitney, SC Jarvis, ...
Journal of Comparative Neurology 521 (16), 3614-3665, 2013
Epigenome-wide study uncovers large-scale changes in histone acetylation driven by tau pathology in aging and Alzheimer’s human brains
HU Klein, C McCabe, E Gjoneska, SE Sullivan, BJ Kaskow, A Tang, ...
Nature neuroscience 22 (1), 37-46, 2019
A comparative genomics multitool for scientific discovery and conservation
Nature 587 (7833), 240-245, 2020
Core and region-enriched networks of behaviorally regulated genes and the singing genome
O Whitney, AR Pfenning, JT Howard, CA Blatti, F Liu, JM Ward, R Wang, ...
Science 346 (6215), 1256780, 2014
High-throughput functional comparison of promoter and enhancer activities
TA Nguyen, RD Jones, AR Snavely, AR Pfenning, R Kirchner, M Hemberg, ...
Genome research 26 (8), 1023-1033, 2016
Molecular profiling of the developing avian telencephalon: regional timing and brain subdivision continuities
CC Chen, CM Winkler, AR Pfenning, ED Jarvis
Journal of Comparative neurology 521 (16), 3666-3701, 2013
Relation of addiction genes to hypothalamic gene changes subserving genesis and gratification of a classic instinct, sodium appetite
WB Liedtke, MJ McKinley, LL Walker, H Zhang, AR Pfenning, J Drago, ...
Proceedings of the National Academy of Sciences 108 (30), 12509, 2011
A modular approach to vocal learning: disentangling the diversity of a complex behavioral trait
M Wirthlin, EF Chang, M Knörnschild, LA Krubitzer, CV Mello, CT Miller, ...
Neuron 104 (1), 87-99, 2019
Population-specific neuromodulation prolongs therapeutic benefits of deep brain stimulation
TA Spix, S Nanivadekar, N Toong, IM Kaplow, BR Isett, Y Goksen, ...
Science 374 (6564), 201-206, 2021
A comparative genomics approach to identifying the plasticity transcriptome
AR Pfenning, R Schwartz, AL Barth
BMC neuroscience 8 (1), 1-18, 2007
Transcriptional alterations in dorsolateral prefrontal cortex and nucleus accumbens implicate neuroinflammation and synaptic remodeling in opioid use disorder
ML Seney, SM Kim, JR Glausier, MA Hildebrand, X Xue, W Zong, J Wang, ...
Biological Psychiatry 90 (8), 550-562, 2021
The transcription factor calcium‐response factor limits NMDA receptor‐dependent transcription in the developing brain
MR Lyons, LF Chen, JV Deng, C Finn, AR Pfenning, A Sabhlok, ...
Journal of neurochemistry 137 (2), 164-176, 2016
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