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Andreas R Pfenning
Andreas R Pfenning
Assistant Professor, Carnegie Mellon University
Verified email at cmu.edu
Title
Cited by
Cited by
Year
Integrative analysis of 111 reference human epigenomes
Roadmap Epigenomics Consortium Integrative analysis coordination Kundaje ...
Nature 518 (7539), 317-330, 2015
5152*2015
Comparative genomics reveals insights into avian genome evolution and adaptation
G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ...
Science 346 (6215), 1311-1320, 2014
9002014
The genome of a songbird
WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ...
Nature 464 (7289), 757-762, 2010
9002010
Integrative analysis of 111 reference human epigenomes
CR Epigenomics, A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, ...
Nature 518 (7539), 317-330, 2015
6492015
Activity-induced DNA breaks govern the expression of neuronal early-response genes
R Madabhushi, F Gao, AR Pfenning, L Pan, S Yamakawa, J Seo, ...
Cell 161 (7), 1592-1605, 2015
5602015
Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease
E Gjoneska, AR Pfenning, H Mathys, G Quon, A Kundaje, LH Tsai, ...
Nature 518 (7539), 365-369, 2015
5142015
Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates
J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ...
Proceedings of the National Academy of Sciences 117 (36), 22311-22322, 2020
4652020
Convergent transcriptional specializations in the brains of humans and song-learning birds
AR Pfenning, E Hara, O Whitney, MV Rivas, R Wang, PL Roulhac, ...
Science 346 (6215), 1256846, 2014
4312014
Global view of the functional molecular organization of the avian cerebrum: mirror images and functional columns
ED Jarvis, J Yu, MV Rivas, H Horita, G Feenders, O Whitney, SC Jarvis, ...
Journal of Comparative Neurology 521 (16), 3614-3665, 2013
2092013
Epigenome-wide study uncovers large-scale changes in histone acetylation driven by tau pathology in aging and Alzheimer’s human brains
HU Klein, C McCabe, E Gjoneska, SE Sullivan, BJ Kaskow, A Tang, ...
Nature neuroscience 22 (1), 37-46, 2019
1422019
A comparative genomics multitool for scientific discovery and conservation
Nature 587 (7833), 240-245, 2020
1222020
Core and region-enriched networks of behaviorally regulated genes and the singing genome
O Whitney, AR Pfenning, JT Howard, CA Blatti, F Liu, JM Ward, R Wang, ...
Science 346 (6215), 1256780, 2014
1112014
High-throughput functional comparison of promoter and enhancer activities
TA Nguyen, RD Jones, AR Snavely, AR Pfenning, R Kirchner, M Hemberg, ...
Genome research 26 (8), 1023-1033, 2016
1042016
Molecular profiling of the developing avian telencephalon: regional timing and brain subdivision continuities
CC Chen, CM Winkler, AR Pfenning, ED Jarvis
Journal of Comparative neurology 521 (16), 3666-3701, 2013
832013
Relation of addiction genes to hypothalamic gene changes subserving genesis and gratification of a classic instinct, sodium appetite
WB Liedtke, MJ McKinley, LL Walker, H Zhang, AR Pfenning, J Drago, ...
Proceedings of the National Academy of Sciences 108 (30), 12509, 2011
722011
A modular approach to vocal learning: disentangling the diversity of a complex behavioral trait
M Wirthlin, EF Chang, M Knörnschild, LA Krubitzer, CV Mello, CT Miller, ...
Neuron 104 (1), 87-99, 2019
392019
Population-specific neuromodulation prolongs therapeutic benefits of deep brain stimulation
TA Spix, S Nanivadekar, N Toong, IM Kaplow, BR Isett, Y Goksen, ...
Science 374 (6564), 201-206, 2021
372021
A comparative genomics approach to identifying the plasticity transcriptome
AR Pfenning, R Schwartz, AL Barth
BMC neuroscience 8 (1), 1-18, 2007
352007
Transcriptional alterations in dorsolateral prefrontal cortex and nucleus accumbens implicate neuroinflammation and synaptic remodeling in opioid use disorder
ML Seney, SM Kim, JR Glausier, MA Hildebrand, X Xue, W Zong, J Wang, ...
Biological Psychiatry 90 (8), 550-562, 2021
342021
The transcription factor calcium‐response factor limits NMDA receptor‐dependent transcription in the developing brain
MR Lyons, LF Chen, JV Deng, C Finn, AR Pfenning, A Sabhlok, ...
Journal of neurochemistry 137 (2), 164-176, 2016
302016
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