|COVID-19 transmission, current treatment, and future therapeutic strategies|
VS Salian, JA Wright, PT Vedell, S Nair, C Li, M Kandimalla, X Tang, ...
Molecular pharmaceutics 18 (3), 754-771, 2021
|MAP-RSeq: Mayo analysis pipeline for RNA sequencing|
KR Kalari, AA Nair, JD Bhavsar, DR O’Brien, JI Davila, MA Bockol, J Nie, ...
BMC bioinformatics 15, 1-11, 2014
|Longitudinal multi-omics reveals subset-specific mechanisms underlying irritable bowel syndrome|
RAT Mars, Y Yang, T Ward, M Houtti, S Priya, HR Lekatz, X Tang, Z Sun, ...
Cell 182 (6), 1460-1473. e17, 2020
|Circular RNAs and their associations with breast cancer subtypes|
AA Nair, N Niu, X Tang, KJ Thompson, L Wang, JP Kocher, ...
Oncotarget 7 (49), 80967, 2016
|A comprehensive analysis of breast cancer microbiota and host gene expression|
KJ Thompson, JN Ingle, X Tang, N Chia, PR Jeraldo, MR Walther-Antonio, ...
PloS one 12 (11), e0188873, 2017
|RNA toxicity and missplicing in the common eye disease fuchs endothelial corneal dystrophy|
J Du, RA Aleff, E Soragni, K Kalari, J Nie, X Tang, J Davila, JP Kocher, ...
Journal of Biological Chemistry 290 (10), 5979-5990, 2015
|Systems biology of the clock in Neurospora crassa|
W Dong, X Tang, Y Yu, R Nilsen, R Kim, J Griffith, J Arnold, HB Schüttler
PloS one 3 (8), e3105, 2008
|Tumor sequencing and patient-derived xenografts in the neoadjuvant treatment of breast cancer|
MP Goetz, KR Kalari, VJ Suman, AM Moyer, J Yu, DW Visscher, ...
JNCI: Journal of the National Cancer Institute 109 (7), djw306, 2017
|Genome-scale identification of cell-wall related genes in Arabidopsis based on co-expression network analysis|
S Wang, Y Yin, Q Ma, X Tang, D Hao, Y Xu
BMC plant biology 12, 1-12, 2012
|Trinucleotide repeat expansion in the transcription factor 4 (TCF4) gene leads to widespread mRNA splicing changes in Fuchs' endothelial corneal dystrophy|
ED Wieben, RA Aleff, X Tang, ML Butz, KR Kalari, EW Highsmith, J Jen, ...
Investigative Ophthalmology & Visual Science 58 (1), 343-352, 2017
|A genetic network for the clock of Neurospora crassa|
Y Yu, W Dong, C Altimus, X Tang, J Griffith, M Morello, L Dudek, J Arnold, ...
Proceedings of the National Academy of Sciences 104 (8), 2809-2814, 2007
|Establishing and characterizing patient-derived xenografts using pre-chemotherapy percutaneous biopsy and post-chemotherapy surgical samples from a prospective neoadjuvant …|
J Yu, B Qin, AM Moyer, JP Sinnwell, KJ Thompson, JA Copland, ...
Breast Cancer Research 19, 1-13, 2017
|Deep sequence analysis of non-small cell lung cancer: integrated analysis of gene expression, alternative splicing, and single nucleotide variations in lung adenocarcinomas …|
KR Kalari, D Rossell, BM Necela, YW Asmann, A Nair, S Baheti, ...
Frontiers in oncology 2, 18669, 2012
|FOXA1 overexpression suppresses interferon signaling and immune response in cancer|
Y He, L Wang, T Wei, YT Xiao, H Sheng, H Su, DP Hollern, X Zhang, J Ma, ...
The Journal Of Clinical Investigation 131 (14), 2021
|Transcriptome analysis of garlic-induced hepatoprotection against alcoholic fatty liver|
R Raghu, CT Liu, MH Tsai, X Tang, KR Kalari, S Subramanian, LY Sheen
Journal of agricultural and food chemistry 60 (44), 11104-11119, 2012
|The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data|
X Tang, S Baheti, K Shameer, KJ Thompson, Q Wills, N Niu, IN Holcomb, ...
Nucleic acids research 42 (22), e172-e172, 2014
|Transcriptomic analysis to identify genes associated with selective hippocampal vulnerability in Alzheimer’s disease|
AM Crist, KM Hinkle, X Wang, CM Moloney, BJ Matchett, SA Labuzan, ...
Nature communications 12 (1), 2311, 2021
|Exome sequencing reveals frequent deleterious germline variants in cancer susceptibility genes in women with invasive breast cancer undergoing neoadjuvant chemotherapy|
MS Ellingson, SN Hart, KR Kalari, V Suman, KA Schahl, TJ Dockter, ...
Breast cancer research and treatment 153, 435-443, 2015
|Transcriptome-wide analysis of UTRs in non-small cell lung cancer reveals cancer-related genes with SNV-induced changes on RNA secondary structure and miRNA target sites|
R Sabarinathan, A Wenzel, P Novotny, X Tang, KR Kalari, J Gorodkin
PloS one 9 (1), e82699, 2014
|BBBomics-human blood brain barrier transcriptomics hub|
KR Kalari, KJ Thompson, AA Nair, X Tang, MA Bockol, N Jhawar, ...
Frontiers in Neuroscience 10, 71, 2016