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Engin Deniz
Engin Deniz
Verified email at yale.edu
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Year
Visualizing flow in an intact CSF network using optical coherence tomography: implications for human congenital hydrocephalus
P Ackermann, C Furey, IB Fink, S Jonas, MK Khokha, KT Kahle, E Deniz
Scientific reports 9 (1), 1-15, 2019
222019
Analysis of craniocardiac malformations in Xenopus using optical coherence tomography
E Deniz, S Jonas, M Hooper, J N Griffin, MA Choma, MK Khokha
Scientific reports 7 (1), 1-13, 2017
212017
CRISPR/Cas9 F0 Screening of Congenital Heart Disease Genes in Xenopus tropicalis
E Deniz, EK Mis, M Lane, MK Khokha
Xenopus, 163-174, 2018
192018
RPSA, a candidate gene for isolated congenital asplenia, is required for pre-rRNA processing and spleen formation in Xenopus
JN Griffin, SB Sondalle, A Robson, EK Mis, G Griffin, SS Kulkarni, E Deniz, ...
Development 145 (20), dev166181, 2018
152018
Familial dilated cardiomyopathy associated with a novel combination of compound heterozygous TNNC1 variants
M Landim-Vieira, JR Johnston, W Ji, EK Mis, J Tijerino, ...
Frontiers in Physiology, 1612, 2020
142020
Endogenous contrast blood flow imaging in embryonic hearts using hemoglobin contrast subtraction angiography
E Deniz, S Jonas, M Khokha, MA Choma
Optics letters 37 (14), 2979-2981, 2012
92012
In Xenopus ependymal cilia drive embryonic CSF circulation and brain development independently of cardiac pulsatile forces
AH Dur, T Tang, S Viviano, A Sekuri, HR Willsey, HD Tagare, KT Kahle, ...
Fluids and Barriers of the CNS 17 (1), 1-22, 2020
82020
Paired Box 9 (PAX9), the RNA polymerase II transcription factor, regulates human ribosome biogenesis and craniofacial development
KI Farley-Barnes, E Deniz, MM Overton, MK Khokha, SJ Baserga
PLoS genetics 16 (8), e1008967, 2020
82020
DLG5 variants are associated with multiple congenital anomalies including ciliopathy phenotypes
J Marquez, N Mann, K Arana, E Deniz, W Ji, M Konstantino, EK Mis, ...
Journal of medical genetics 58 (7), 453-464, 2021
72021
PPIL4 is essential for brain angiogenesis and implicated in intracranial aneurysms in humans
T Barak, E Ristori, AG Ercan-Sencicek, DF Miyagishima, ...
Nature medicine 27 (12), 2165-2175, 2021
62021
Impaired neurogenesis alters brain biomechanics in a neuroprogenitor-based genetic subtype of congenital hydrocephalus
PQ Duy, SC Weise, C Marini, XJ Li, D Liang, PJ Dahl, S Ma, A Spajic, ...
Nature neuroscience 25 (4), 458-473, 2022
52022
N Griffin J, Choma MA, Khokha MK
E Deniz, S Jonas, M Hooper
Analysis of craniocardiac malformations in xenopus using optical coherence …, 2017
52017
Author Correction: Visualizing flow in an intact CSF network using optical coherence tomography: implications for human congenital hydrocephalus
P Date, P Ackermann, C Furey, IB Fink, S Jonas, MK Khokha, KT Kahle, ...
Scientific Reports 10, 2020
42020
Gaussian process post-processing for particle tracking velocimetry
T Tang, E Deniz, MK Khokha, HD Tagare
Biomedical optics express 10 (7), 3196-3216, 2019
42019
A novel approach to quantifying ciliary physiology: microfluidic mixing driven by a ciliated biological surface
S Jonas, E Zhou, E Deniz, B Huang, K Chandrasekera, D Bhattacharya, ...
Lab on a Chip 13 (21), 4160-4163, 2013
22013
Xenopus tadpole craniocardiac imaging using optical coherence tomography
E Deniz, EK Mis, M Lane, MK Khokha
Cold Spring Harbor Protocols 2022 (5), pdb. prot105676, 2022
12022
CC2D1A as a novel ciliopathy gene
I Sakin, G Tuncel, SO Sag, OI Kaplan, MK Khokha, MC Ergoren, E Deniz, ...
SPRINGERNATURE, CAMPUS, 4 CRINAN ST, LONDON, N1 9XW, ENGLAND, 2020
12020
Quantitative Phenotyping of Xenopus Embryonic Heart Pathophysiology Using Hemoglobin Contrast Subtraction Angiography to Screen Human Cardiomyopathies
E Deniz, S Jonas, MK Khokha, MA Choma
Frontiers in Physiology 10, 1197, 2019
12019
Microfluidic Phenotyping of Cilia-Driven Mixing for the Assessment of Respiratory Diseases
S Jonas, E Deniz, MK Khokha, TM Deserno, MA Choma
Bildverarbeitung für die Medizin 2012, 135-140, 2012
12012
A retrospective cohort analysis of the Yale pediatric genomics discovery program
S Al‐Ali, L Jeffries, EVS Faustino, W Ji, E Mis, M Konstantino, C Zerillo, ...
American Journal of Medical Genetics Part A, 2022
2022
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