| Strange nonchaotic attractors A Prasad, SS Negi, R Ramaswamy International Journal of bifurcation and Chaos 11 (02), 291-309, 2001 | 187 | 2001 |
| InterProSurf: a web server for predicting interacting sites on protein surfaces SS Negi, CH Schein, N Oezguen, TD Power, W Braun Bioinformatics 23 (24), 3397-3399, 2007 | 178 | 2007 |
| Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 | 160 | 2016 |
| Automated detection of conformational epitopes using phage display peptide sequences SS Negi, W Braun Bioinformatics and biology insights 3, BBI. S2745, 2009 | 103 | 2009 |
| Conformational flexibility of mammalian cytochrome P450 2B4 in binding imidazole inhibitors with different ring chemistry and side chains: solution thermodynamics and molecular … BK Muralidhara, S Negi, CC Chin, W Braun, JR Halpert Journal of Biological Chemistry 281 (12), 8051-8061, 2006 | 86 | 2006 |
| Comprehensive 3D-modeling of allergenic proteins and amino acid composition of potential conformational IgE epitopes N Oezguen, B Zhou, SS Negi, O Ivanciuc, CH Schein, G Labesse, ... Molecular immunology 45 (14), 3740-3747, 2008 | 78 | 2008 |
| Structural analysis of linear and conformational epitopes of allergens O Ivanciuc, CH Schein, T Garcia, N Oezguen, SS Negi, W Braun Regulatory toxicology and pharmacology 54 (3), S11-S19, 2009 | 57 | 2009 |
| Statistical analysis of physical-chemical properties and prediction of protein-protein interfaces SS Negi, W Braun Journal of molecular modeling 13, 1157-1167, 2007 | 55 | 2007 |
| The importance of the 2S albumins for allergenicity and cross-reactivity of peanuts, tree nuts, and sesame seeds SC Dreskin, SJ Koppelman, S Andorf, KC Nadeau, A Kalra, W Braun, ... Journal of Allergy and Clinical Immunology 147 (4), 1154-1163, 2021 | 52 | 2021 |
| Conformational IgE epitopes of peanut allergens Ara h 2 and Ara h 6 X Chen, SS Negi, S Liao, V Gao, W Braun, SC Dreskin Clinical & Experimental Allergy 46 (8), 1120-1128, 2016 | 51 | 2016 |
| Membrane fusion triggering: three modules with different structure and function in the upper half of the measles virus attachment protein stalk CK Navaratnarajah, S Negi, W Braun, R Cattaneo Journal of Biological Chemistry 287 (46), 38543-38551, 2012 | 50 | 2012 |
| Base of the measles virus fusion trimer head receives the signal that triggers membrane fusion S Apte-Sengupta, S Negi, VHJ Leonard, N Oezguen, CK Navaratnarajah, ... Journal of Biological Chemistry 287 (39), 33026-33035, 2012 | 46 | 2012 |
| Base of the measles virus fusion trimer head receives the signal that triggers membrane fusion S Apte-Sengupta, S Negi, VHJ Leonard, N Oezguen, CK Navaratnarajah, ... Journal of Biological Chemistry 287 (39), 33026-33035, 2012 | 46 | 2012 |
| Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity SS Negi, W Braun Bioinformatics 33 (7), 1014-1020, 2017 | 44 | 2017 |
| Western equine encephalitis virus: evolutionary analysis of a declining alphavirus based on complete genome sequences NA Bergren, AJ Auguste, NL Forrester, SS Negi, WA Braun, SC Weaver Journal of virology 88 (16), 9260-9267, 2014 | 42 | 2014 |
| Rational engineering of human cytochrome P450 2B6 for enhanced expression and stability: importance of a Leu264→ Phe substitution S Kumar, Y Zhao, L Sun, SS Negi, JR Halpert, BK Muralidhara Molecular pharmacology 72 (5), 1191-1199, 2007 | 40 | 2007 |
| Bifurcations and transitions in the quasiperiodically driven logistic map SS Negi, A Prasad, R Ramaswamy Physica D: Nonlinear Phenomena 145 (1-2), 1-12, 2000 | 37 | 2000 |
| Thermodynamics of phosphopeptide tethering to BRCT: the structural minima for inhibitor design GL Lokesh, BK Muralidhara, SS Negi, A Natarajan Journal of the American Chemical Society 129 (35), 10658-10659, 2007 | 32 | 2007 |
| Regional and temporal coordinated mutation patterns in SARS-CoV-2 spike protein revealed by a clustering and network analysis SS Negi, CH Schein, W Braun Scientific reports 12 (1), 1128, 2022 | 29 | 2022 |
| Determining functionally important amino acid residues of the E1 protein of Venezuelan equine encephalitis virus SS Negi, AA Kolokoltsov, CH Schein, RA Davey, W Braun Journal of molecular modeling 12, 921-929, 2006 | 28 | 2006 |
