Nicholas F Parrish
Nicholas F Parrish
RIKEN Center for Integrative Medical Sciences
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A global reference for human genetic variation
1000 Genomes Project Consortium
Nature 526 (7571), 68, 2015
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection
JF Salazar-Gonzalez, MG Salazar, BF Keele, GH Learn, EE Giorgi, H Li, ...
Journal of Experimental Medicine 206 (6), 1273-1289, 2009
Phenotypic properties of transmitted founder HIV-1
NF Parrish, F Gao, H Li, EE Giorgi, HJ Barbian, EH Parrish, L Zajic, ...
Proceedings of the National Academy of Sciences 110 (17), 6626-6633, 2013
Functional relationship between bacterial cell density and the efficacy of antibiotics
KI Udekwu, N Parrish, P Ankomah, F Baquero, BR Levin
Journal of antimicrobial chemotherapy 63 (4), 745-757, 2009
Transmitted/founder and chronic subtype C HIV-1 use CD4 and CCR5 receptors with equal efficiency and are not inhibited by blocking the integrin α4β7
NF Parrish, CB Wilen, LB Banks, SS Iyer, JM Pfaff, JF Salazar-Gonzalez, ...
PLoS pathogens 8 (5), e1002686, 2012
Phenotypic and immunologic comparison of clade B transmitted/founder and chronic HIV-1 envelope glycoproteins
CB Wilen, NF Parrish, JM Pfaff, JM Decker, EA Henning, H Haim, ...
Journal of virology 85 (17), 8514-8527, 2011
Quantitative phosphoproteomics reveals extensive cellular reprogramming during HIV-1 entry
JA Wojcechowskyj, CA Didigu, JY Lee, NF Parrish, R Sinha, BH Hahn, ...
Cell host & microbe 13 (5), 613-623, 2013
Transmitted/founder and chronic HIV-1 envelope proteins are distinguished by differential utilization of CCR5
ZF Parker, SS Iyer, CB Wilen, NF Parrish, KC Chikere, FH Lee, CA Didigu, ...
Journal of virology 87 (5), 2401-2411, 2013
Analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms
A Abyzov, S Li, DR Kim, M Mohiyuddin, AM Stütz, NF Parrish, XJ Mu, ...
Nature communications 6 (1), 7256, 2015
Molecular identification, cloning and characterization of transmitted/founder HIV-1 subtype A, D and A/D infectious molecular clones
J Baalwa, S Wang, NF Parrish, JM Decker, BF Keele, GH Learn, L Yue, ...
Virology 436 (1), 33-48, 2013
Primary infection by a human immunodeficiency virus with atypical coreceptor tropism
C Jiang, NF Parrish, CB Wilen, H Li, Y Chen, JW Pavlicek, A Berg, X Lu, ...
Journal of virology 85 (20), 10669-10681, 2011
piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals
NF Parrish, K Fujino, Y Shiromoto, YW Iwasaki, H Ha, J Xing, A Makino, ...
RNA 21 (10), 1691-1703, 2015
Mucosal simian immunodeficiency virus transmission in African green monkeys: susceptibility to infection is proportional to target cell availability at mucosal sites
I Pandrea, NF Parrish, K Raehtz, T Gaufin, HJ Barbian, D Ma, J Kristoff, ...
Journal of virology 86 (8), 4158-4168, 2012
piRNA-guided CRISPR-like immunity in eukaryotes
Y Ophinni, U Palatini, Y Hayashi, NF Parrish
Trends in immunology 40 (11), 998-1010, 2019
Genetic identity and biological phenotype of a transmitted/founder virus representative of nonpathogenic simian immunodeficiency virus infection in African green monkeys
CW Gnanadurai, I Pandrea, NF Parrish, MH Kraus, GH Learn, MG Salazar, ...
Journal of virology 84 (23), 12245-12254, 2010
Endogenous retroviruses drive species-specific germline transcriptomes in mammals
A Sakashita, S Maezawa, K Takahashi, KG Alavattam, M Yukawa, YC Hu, ...
Nature structural & molecular biology 27 (10), 967-977, 2020
Transcription profiling demonstrates epigenetic control of non-retroviral RNA virus-derived elements in the human genome
K Sofuku, NF Parrish, T Honda, K Tomonaga
Cell reports 12 (10), 1548-1554, 2015
A rev1–vpu polymorphism unique to HIV-1 subtype A and C strains impairs envelope glycoprotein expression from rev–vpu–env cassettes and reduces virion infectivity in …
MH Kraus, NF Parrish, KS Shaw, JM Decker, BF Keele, ...
Virology 397 (2), 346-357, 2010
Species-specific host factors rather than virus-intrinsic virulence determine primate lentiviral pathogenicity
S Joas, EH Parrish, CW Gnanadurai, E Lump, CM Stürzel, NF Parrish, ...
Nature communications 9 (1), 1371, 2018
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