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Lukas Burger
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Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP
M Hafner, M Landthaler, L Burger, M Khorshid, J Hausser, P Berninger, ...
Cell 141 (1), 129-141, 2010
32182010
DNA-binding factors shape the mouse methylome at distal regulatory regions
MB Stadler, R Murr, L Burger, R Ivanek, F Lienert, A Schöler, E Nimwegen, ...
Nature 480 (7378), 490-495, 2011
14682011
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
T Baubec, DF Colombo, C Wirbelauer, J Schmidt, L Burger, AR Krebs, ...
Nature 520 (7546), 243-247, 2015
6872015
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins
S Kishore, L Jaskiewicz, L Burger, J Hausser, M Khorshid, M Zavolan
Nature methods 8 (7), 559-564, 2011
5472011
Competition between DNA methylation and transcription factors determines binding of NRF1
S Domcke, AF Bardet, P Adrian Ginno, D Hartl, L Burger, D Schübeler
Nature 528 (7583), 575-579, 2015
4722015
PAR-CliP-a method to identify transcriptome-wide the binding sites of RNA binding proteins
M Hafner, M Landthaler, L Burger, M Khorshid, J Hausser, P Berninger, ...
JoVE (Journal of Visualized Experiments), e2034, 2010
3542010
Dynamic DNA methylation orchestrates cardiomyocyte development, maturation and disease
R Gilsbach, S Preissl, BA Grüning, T Schnick, L Burger, V Benes, A Würch, ...
Nature communications 5 (1), 5288, 2014
3102014
Analysis of intronic and exonic reads in RNA-seq data characterizes transcriptional and post-transcriptional regulation
D Gaidatzis, L Burger, M Florescu, MB Stadler
Nature biotechnology 33 (7), 722-729, 2015
2762015
Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions
A Feldmann, R Ivanek, R Murr, D Gaidatzis, L Burger, D Schübeler
PLoS genetics 9 (12), e1003994, 2013
2452013
Disentangling direct from indirect co-evolution of residues in protein alignments
L Burger, E Van Nimwegen
PLoS computational biology 6 (1), e1000633, 2010
2342010
Accurate prediction of protein–protein interactions from sequence alignments using a Bayesian method
L Burger, E Van Nimwegen
Molecular systems biology 4 (1), 165, 2008
2292008
Identification of active regulatory regions from DNA methylation data
L Burger, D Gaidatzis, D Schübeler, MB Stadler
Nucleic acids research 41 (16), e155-e155, 2013
2152013
DNA methylation is required for the control of stem cell differentiation in the small intestine
KL Sheaffer, R Kim, R Aoki, EN Elliott, J Schug, L Burger, D Schübeler, ...
Genes & development 28 (6), 652-664, 2014
2102014
Genome-wide single-molecule footprinting reveals high RNA polymerase II turnover at paused promoters
AR Krebs, D Imanci, L Hoerner, D Gaidatzis, L Burger, D Schübeler
Molecular cell 67 (3), 411-422. e4, 2017
1932017
Aging-dependent demethylation of regulatory elements correlates with chromatin state and improved β cell function
D Avrahami, C Li, J Zhang, J Schug, R Avrahami, S Rao, MB Stadler, ...
Cell metabolism 22 (4), 619-632, 2015
1842015
Target genes of Topoisomerase IIβ regulate neuronal survival and are defined by their chromatin state
VK Tiwari, L Burger, V Nikoletopoulou, R Deogracias, S Thakurela, ...
Proceedings of the National Academy of Sciences 109 (16), E934-E943, 2012
1732012
Mechanisms of OCT4-SOX2 motif readout on nucleosomes
AK Michael, RS Grand, L Isbel, S Cavadini, Z Kozicka, G Kempf, ...
Science 368 (6498), 1460-1465, 2020
1632020
Short sequences can efficiently recruit histone H3 lysine 27 trimethylation in the absence of enhancer activity and DNA methylation
P Jermann, L Hoerner, L Burger, D Schübeler
Proceedings of the National Academy of Sciences 111 (33), E3415-E3421, 2014
1522014
Pioneering activity of the C-terminal domain of EBF1 shapes the chromatin landscape for B cell programming
S Boller, S Ramamoorthy, D Akbas, R Nechanitzky, L Burger, R Murr, ...
Immunity 44 (3), 527-541, 2016
1232016
A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity
PA Ginno, D Gaidatzis, A Feldmann, L Hoerner, D Imanci, L Burger, ...
Nature communications 11 (1), 2680, 2020
1122020
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Articles 1–20