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Cristian Coarfa
Cristian Coarfa
Associate Professor in Molecular and Cellular Biology, Baylor College of Medicine
Verified email at bcm.edu
Title
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Cited by
Year
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
49182015
A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy
K Aagaard, K Riehle, J Ma, N Segata, TA Mistretta, C Coarfa, S Raza, ...
PloS one 7 (6), e36466, 2012
6972012
The somatic genomic landscape of chromophobe renal cell carcinoma
CF Davis, CJ Ricketts, M Wang, L Yang, AD Cherniack, H Shen, C Buhay, ...
Cancer cell 26 (3), 319-330, 2014
6842014
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097-1105, 2010
6832010
Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome
DM Saulnier, K Riehle, TA Mistretta, MA Diaz, D Mandal, S Raza, ...
Gastroenterology 141 (5), 1782-1791, 2011
6712011
Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood
MN Davies, M Volta, R Pidsley, K Lunnon, A Dixit, S Lovestone, C Coarfa, ...
Genome biology 13 (6), 1-14, 2012
6592012
An integrative variant analysis suite for whole exome next-generation sequencing data
D Challis, J Yu, US Evani, AR Jackson, S Paithankar, C Coarfa, ...
BMC bioinformatics 13 (1), 1-12, 2012
2922012
Circadian homeostasis of liver metabolism suppresses hepatocarcinogenesis
NM Kettner, H Voicu, MJ Finegold, C Coarfa, A Sreekumar, N Putluri, ...
Cancer cell 30 (6), 909-924, 2016
2882016
Proinflammatory role for let-7 microRNAS in experimental asthma
S Polikepahad, JM Knight, AO Naghavi, T Oplt, CJ Creighton, C Shaw, ...
Journal of Biological Chemistry 285 (39), 30139-30149, 2010
2612010
ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads
CA Miller, O Hampton, C Coarfa, A Milosavljevic
PloS one 6 (1), e16327, 2011
2472011
The repertoire and features of human platelet microRNAs
H Ple, P Landry, A Benham, C Coarfa, PH Gunaratne, P Provost
PloS one 7 (12), e50746, 2012
2212012
Fatty acid oxidation-driven Src links mitochondrial energy reprogramming and oncogenic properties in triple-negative breast cancer
JH Park, S Vithayathil, S Kumar, PL Sung, LE Dobrolecki, V Putluri, ...
Cell reports 14 (9), 2154-2165, 2016
2182016
Prostate cancer-associated mutations in speckle-type POZ protein (SPOP) regulate steroid receptor coactivator 3 protein turnover
C Geng, B He, L Xu, CE Barbieri, VK Eedunuri, SA Chew, M Zimmermann, ...
Proceedings of the National Academy of Sciences 110 (17), 6997-7002, 2013
2152013
Performance analysis of TLS Web servers
C Coarfa, P Druschel, DS Wallach
ACM Transactions on Computer Systems (TOCS) 24 (1), 39-69, 2006
2152006
A SNP discovery method to assess variant allele probability from next-generation resequencing data
Y Shen, Z Wan, C Coarfa, R Drabek, L Chen, EA Ostrowski, Y Liu, ...
Genome research 20 (2), 273-280, 2010
2142010
An evaluation of global address space languages: co-array fortran and unified parallel c
C Coarfa, Y Dotsenko, J Mellor-Crummey, F Cantonnet, T El-Ghazawi, ...
Proceedings of the tenth ACM SIGPLAN symposium on Principles and practice of …, 2005
2112005
Genomic, pathway network, and immunologic features distinguishing squamous carcinomas
JD Campbell, C Yau, R Bowlby, Y Liu, K Brennan, H Fan, AM Taylor, ...
Cell reports 23 (1), 194-212. e6, 2018
2042018
An epigenomic approach to therapy for tamoxifen-resistant breast cancer
Q Feng, Z Zhang, MJ Shea, CJ Creighton, C Coarfa, SG Hilsenbeck, ...
Cell research 24 (7), 809-819, 2014
1892014
SOX2 regulates YAP1 to maintain stemness and determine cell fate in the osteo-adipo lineage
E Seo, U Basu-Roy, PH Gunaratne, C Coarfa, DS Lim, C Basilico, ...
Cell reports 3 (6), 2075-2087, 2013
1852013
Oncogenic lncRNA downregulates cancer cell antigen presentation and intrinsic tumor suppression
Q Hu, Y Ye, LC Chan, Y Li, K Liang, A Lin, SD Egranov, Y Zhang, W Xia, ...
Nature immunology 20 (7), 835-851, 2019
1782019
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