Andrea Tanzer
Andrea Tanzer
Medical University of Vienna
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Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression
T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ...
Genome research 22 (9), 1775-1789, 2012
GENCODE: the reference human genome annotation for The ENCODE Project
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome research 22 (9), 1760-1774, 2012
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
Paired-end mapping reveals extensive structural variation in the human genome
JO Korbel, AE Urban, JP Affourtit, B Godwin, F Grubert, JF Simons, ...
Science 318 (5849), 420-426, 2007
Molecular evolution of a microRNA cluster
A Tanzer, PF Stadler
Journal of molecular biology 339 (2), 327-335, 2004
The expansion of the metazoan microRNA repertoire
J Hertel, M Lindemeyer, K Missal, C Fried, A Tanzer, C Flamm, ...
BMC genomics 7, 1-15, 2006
The GENCODE pseudogene resource
B Pei, C Sisu, A Frankish, C Howald, L Habegger, XJ Mu, R Harte, ...
Genome biology 13, 1-26, 2012
Comparative analysis of the transcriptome across distant species
MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ...
Nature 512 (7515), 445-448, 2014
A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection
S Hoffmann, C Otto, G Doose, A Tanzer, D Langenberger, S Christ, ...
Genome biology 15, 1-11, 2014
Nucleotide-resolution analysis of structural variants using BreakSeq and a breakpoint library
HYK Lam, XJ Mu, AM Stütz, A Tanzer, PD Cayting, M Snyder, PM Kim, ...
Nature biotechnology 28 (1), 47-55, 2010
Structured RNAs in the ENCODE selected regions of the human genome
S Washietl, JS Pedersen, JO Korbel, C Stocsits, AR Gruber, ...
Genome research 17 (6), 852-864, 2007
Evolution of microRNAs located within Hox gene clusters
A Tanzer, CT Amemiya, CB Kim, PF Stadler
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2005
GENCODE: the reference human genome annotation for The ENCODE Project. vol. 22
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome Res, 1760-1774, 2012
Predicting RNA secondary structures from sequence and probing data
R Lorenz, MT Wolfinger, A Tanzer, IL Hofacker
Methods 103, 86-98, 2016
Adaptive changes in the transcription factor HoxA-11 are essential for the evolution of pregnancy in mammals
VJ Lynch, A Tanzer, Y Wang, FC Leung, B Gellersen, D Emera, ...
Proceedings of the National Academy of Sciences 105 (39), 14928-14933, 2008
Folding kinetics of large RNAs
M Geis, C Flamm, MT Wolfinger, A Tanzer, IL Hofacker, M Middendorf, ...
Journal of molecular biology 379 (1), 160-173, 2008
Evolutionary patterns of non-coding RNAs
AF Bompfünewerer, C Flamm, C Fried, G Fritzsch, IL Hofacker, ...
Theory in Biosciences 123 (4), 301-369, 2005
RNAs everywhere: Genome‐wide annotation of structured RNAs
R Backofen, SH Bernhart, C Flamm, C Fried, G Fritzsch, J Hackermüller, ...
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2007
Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression
DD Pervouchine, S Djebali, A Breschi, CA Davis, PP Barja, A Dobin, ...
Nature communications 6 (1), 5903, 2015
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