EpiRegio: analysis and retrieval of regulatory elements linked to genes N Baumgarten, D Hecker, S Karunanithi, F Schmidt, M List, MH Schulz Nucleic Acids Research 48 (W1), W193-W199, 2020 | 25 | 2020 |
Exogenous RNAi mechanisms contribute to transcriptome adaptation by phased siRNA clusters in Paramecium S Karunanithi, V Oruganti, S Marker, AM Rodriguez-Viana, F Drews, ... Nucleic acids research 47 (15), 8036-8049, 2019 | 16 | 2019 |
Broad domains of histone marks in the highly compact Paramecium macronuclear genome F Drews, A Salhab, S Karunanithi, M Cheaib, M Jung, MH Schulz, ... Genome research 32 (4), 710-725, 2022 | 10 | 2022 |
Two Piwis with Ago-like functions silence somatic genes at the chromatin level F Drews, S Karunanithi, U Götz, S Marker, R deWijn, M Pirritano, ... RNA biology 18 (sup2), 757-769, 2021 | 8 | 2021 |
Automated analysis of small RNA datasets with RAPID S Karunanithi, M Simon, MH Schulz PeerJ 7, e6710, 2019 | 8 | 2019 |
Feeding exogenous dsRNA interferes with endogenous sRNA accumulation in Paramecium S Karunanithi, V Oruganti, R de Wijn, F Drews, M Cheaib, K Nordström, ... DNA Research 27 (1), dsaa005, 2020 | 5 | 2020 |
Environmental temperature controls accumulation of transacting siRNAs involved in heterochromatin formation M Pirritano, U Götz, S Karunanithi, K Nordström, MH Schulz, M Simon Genes 9 (2), 117, 2018 | 5 | 2018 |
Age‐ and caste‐independent piRNAs in the germline and miRNA profiles linked to caste and fecundity in the ant Temnothorax rugatulus AS Seistrup, M Choppin, S Govind, B Feldmeyer, M Kever, E Karaulanov, ... Molecular ecology 32 (22), 6027-6043, 2023 | | 2023 |
Computational approaches for the analysis of epigenome and transcriptome characterisation in Paramecium tetraurelia S Karunanithi Universitätsbibliothek Johann Christian Senckenberg, 2021 | | 2021 |
Transcripts from multicopy gene families localizing to mouse Y long arm encode piRNAs and proteins RA Jesudasan, K Mishra, P Annapurna, A Chaturvedi, NM Praveena, ... bioRxiv, 407197, 2018 | | 2018 |
Genome wide prediction of monoallelic gene expression from human epigenetic data S Karunanithi, M Schulz F1000Research 7, 2018 | | 2018 |
Automated analysis and comparison of multiple small RNA datasets with RAPID S Karunanithi, M Simon, MH Schulz F1000Research 6, 2017 | | 2017 |