Dario Ghersi
Dario Ghersi
Associate Professor of Biomedical Informatics, University of Nebraska at Omaha
Verified email at unomaha.edu
Title
Cited by
Cited by
Year
SITEHOUND-web: a server for ligand binding site identification in protein structures
M Hernandez, D Ghersi, R Sanchez
Nucleic acids research 37 (suppl_2), W413-W416, 2009
1772009
Narrowed TCR repertoire and viral escape as a consequence of heterologous immunity
M Cornberg, AT Chen, LA Wilkinson, MA Brehm, SK Kim, C Calcagno, ...
The Journal of clinical investigation 116 (5), 1443-1456, 2006
1522006
CD8 memory T cells: cross-reactivity and heterologous immunity
LK Selin, M Cornberg, MA Brehm, SK Kim, C Calcagno, D Ghersi, ...
Seminars in immunology 16 (5), 335-347, 2004
1262004
IFN-induced attrition of CD8 T cells in the presence or absence of cognate antigen during the early stages of viral infections
K Bahl, SK Kim, C Calcagno, D Ghersi, R Puzone, F Celada, LK Selin, ...
The Journal of Immunology 176 (7), 4284-4295, 2006
1212006
Improving accuracy and efficiency of blind protein‐ligand docking by focusing on predicted binding sites
D Ghersi, R Sanchez
Proteins: Structure, Function, and Bioinformatics 74 (2), 417-424, 2009
812009
EasyMIFs and SiteHound: a toolkit for the identification of ligand-binding sites in protein structures
D Ghersi, R Sanchez
Bioinformatics 25 (23), 3185-3186, 2009
582009
Building towards precision medicine: empowering medical professionals for the next revolution
S McGrath, D Ghersi
BMC medical genomics 9 (1), 1-6, 2016
482016
Beyond structural genomics: computational approaches for the identification of ligand binding sites in protein structures
D Ghersi, R Sanchez
Journal of structural and functional genomics 12 (2), 109-117, 2011
412011
Broad TCR repertoire and diverse structural solutions for recognition of an immunodominant CD8+ T cell epitope
IY Song, A Gil, R Mishra, D Ghersi, LK Selin, LJ Stern
Nature structural & molecular biology 24 (4), 395-406, 2017
362017
Biochemical profiling of histone binding selectivity of the yeast bromodomain family
Q Zhang, S Chakravarty, D Ghersi, L Zeng, AN Plotnikov, R Sanchez, ...
PloS one 5 (1), e8903, 2010
362010
Genome-wide detection and analysis of multifunctional genes
Y Pritykin, D Ghersi, M Singh
PLoS Comput Biol 11 (10), e1004467, 2015
262015
molBLOCKS: decomposing small molecule sets and uncovering enriched fragments
D Ghersi, M Singh
Bioinformatics 30 (14), 2081-2083, 2014
242014
Interaction-based discovery of functionally important genes in cancers
D Ghersi, M Singh
Nucleic acids research 42 (3), e18-e18, 2014
242014
Severity of acute infectious mononucleosis correlates with cross-reactive influenza CD8 T-cell receptor repertoires
N Aslan, LB Watkin, A Gil, R Mishra, FG Clark, RM Welsh, D Ghersi, ...
MBio 8 (6), 2017
212017
A discrete computer model of the immune system reveals competitive interactions between the humoral and cellular branch and between cross-reacting memory and na´ve responses
Y Cheng, D Ghersi, C Calcagno, LK Selin, R Puzone, F Celada
Vaccine 27 (6), 833-845, 2009
202009
Disentangling function from topology to infer the network properties of disease genes
D Ghersi, M Singh
BMC Systems Biology 7 (1), 1-12, 2013
152013
Two critical positions in zinc finger domains are heavily mutated in three human cancer types
D Munro, D Ghersi, M Singh
PLoS computational biology 14 (6), e1006290, 2018
102018
FunSet: an open-source software and web server for performing and displaying Gene Ontology enrichment analysis
ML Hale, I Thapa, D Ghersi
BMC bioinformatics 20 (1), 359, 2019
72019
Unique influenza A cross-reactive memory CD8 T-cell receptor repertoire has a potential to protect against EBV seroconversion
LB Watkin, R Mishra, A Gil, N Aslan, D Ghersi, K Luzuriaga, LK Selin
Journal of Allergy and Clinical Immunology 140 (4), 1206-1210, 2017
62017
Forecasting the spread of mosquito-borne disease using publicly accessible data: a case study in Chikungunya
KM Cooper, DR Bastola, R Gandhi, D Ghersi, S Hinrichs, M Morien, ...
AMIA Annual Symposium Proceedings 2016, 431, 2016
62016
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Articles 1–20