| RNA-Seq: a revolutionary tool for transcriptomics Z Wang, M Gerstein, M Snyder Nature reviews genetics 10 (1), 57-63, 2009 | 15104 | 2009 |
| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 13383 | 2012 |
| A map of human genome variation from population scale sequencing 1000 Genomes Project Consortium Nature 467 (7319), 1061, 2010 | 8530 | 2010 |
| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007 | 5888 | 2007 |
| Functional profiling of the Saccharomyces cerevisiae genome G Giaever, AM Chu, L Ni, C Connelly, L Riles, S Véronneau, S Dow, ... nature 418 (6896), 387-391, 2002 | 4985 | 2002 |
| Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis EA Winzeler, DD Shoemaker, A Astromoff, H Liang, K Anderson, B Andre, ... science 285 (5429), 901-906, 1999 | 4859 | 1999 |
| Genetic effects on gene expression across human tissues GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ... Nature 550 (7675), 204-213, 2017 | 3075 | 2017 |
| The transcriptional landscape of the yeast genome defined by RNA sequencing U Nagalakshmi, Z Wang, K Waern, C Shou, D Raha, M Gerstein, ... Science 320 (5881), 1344-1349, 2008 | 3065 | 2008 |
| Global analysis of protein activities using proteome chips H Zhu, M Bilgin, R Bangham, D Hall, A Casamayor, P Bertone, N Lan, ... science 293 (5537), 2101-2105, 2001 | 2971 | 2001 |
| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Overall coordination (data analysis coordination ... Nature 489 (7414), 57-74, 2012 | 2950 | 2012 |
| Annotation of functional variation in personal genomes using RegulomeDB AP Boyle, EL Hong, M Hariharan, Y Cheng, MA Schaub, M Kasowski, ... Genome research 22 (9), 1790-1797, 2012 | 2692 | 2012 |
| The ENCODE (ENCyclopedia of DNA elements) project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science 306 (5696), 636-640, 2004 | 2284 | 2004 |
| ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ... Genome research 22 (9), 1813-1831, 2012 | 2122 | 2012 |
| The GTEx Consortium atlas of genetic regulatory effects across human tissues GTEx Consortium Science 369 (6509), 1318-1330, 2020 | 2094 | 2020 |
| Single-cell chromatin accessibility reveals principles of regulatory variation JD Buenrostro, B Wu, UM Litzenburger, D Ruff, ML Gonzales, MP Snyder, ... Nature 523 (7561), 486-490, 2015 | 1871 | 2015 |
| A comparative encyclopedia of DNA elements in the mouse genome F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ... Nature 515 (7527), 355-364, 2014 | 1826 | 2014 |
| Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing G Robertson, M Hirst, M Bainbridge, M Bilenky, Y Zhao, T Zeng, ... Nature methods 4 (8), 651-657, 2007 | 1779 | 2007 |
| Architecture of the human regulatory network derived from ENCODE data MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ... Nature 489 (7414), 91-100, 2012 | 1689 | 2012 |
| High-quality binary protein interaction map of the yeast interactome network H Yu, P Braun, MA Yıldırım, I Lemmens, K Venkatesan, J Sahalie, ... Science 322 (5898), 104-110, 2008 | 1684 | 2008 |
| A Bayesian networks approach for predicting protein-protein interactions from genomic data R Jansen, H Yu, D Greenbaum, Y Kluger, NJ Krogan, S Chung, A Emili, ... science 302 (5644), 449-453, 2003 | 1618 | 2003 |
