Donghoon Lee
A global reference for human genetic variation
1000 Genomes Project Consortium
Nature 526 (7571), 68, 2015
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...
Nature 578 (7793), 102-111, 2020
Intron retention is a widespread mechanism of tumor-suppressor inactivation
H Jung, D Lee, J Lee, D Park, YJ Kim, WY Park, D Hong, PJ Park, E Lee
Nature genetics 47 (11), 1242-1248, 2015
Perspectives on ENCODE
MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ...
Nature 583 (7818), 693-698, 2020
An integrative ENCODE resource for cancer genomics
J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ...
Nature communications 11 (1), 3696, 2020
Prognostic implications of genetic variants in advanced non-small cell lung cancer: a genome-wide association study
Y Lee, KA Yoon, J Joo, D Lee, K Bae, JY Han, JS Lee
Carcinogenesis 34 (2), 307-313, 2013
Oncogenic function and clinical implications of SLC3A2-NRG1 fusion in invasive mucinous adenocarcinoma of the lung
DH Shin, D Lee, DW Hong, SH Hong, JA Hwang, BI Lee, HJ You, GK Lee, ...
Oncotarget 7 (43), 69450, 2016
MicroRNAs establish uniform traits during the architecture of vertebrate embryos
DM Kasper, A Moro, E Ristori, A Narayanan, G Hill-Teran, E Fleming, ...
Developmental cell 40 (6), 552-565. e5, 2017
Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes
E Rheinbay, MM Nielsen, F Abascal, G Tiao, H Hornshøj, JM Hess, ...
BioRxiv, 237313, 2017
MicroRNA-dependent regulation of biomechanical genes establishes tissue stiffness homeostasis
A Moro, TP Driscoll, LC Boraas, W Armero, DM Kasper, N Baeyens, ...
Nature cell biology 21 (3), 348-358, 2019
STARRPeaker: Uniform processing and accurate identification of STARR-seq active regions
D Lee, M Shi, J Moran, M Wall, J Zhang, J Liu, D Fitzgerald, Y Kyono, ...
Genome Biology 21 (1), 1-24, 2020
Combined burden and functional impact tests for cancer driver discovery using DriverPower
S Shuai, S Gallinger, LD Stein
Nature communications 11 (1), 734, 2020
Network analysis as a grand unifier in biomedical data science
P McGillivray, D Clarke, W Meyerson, J Zhang, D Lee, M Gu, S Kumar, ...
Annual Review of Biomedical Data Science 1, 153-180, 2018
Pathway-based analysis using genome-wide association data from a Korean non-small cell lung cancer study
D Lee, GK Lee, KA Yoon, JS Lee
PloS one 8 (6), e65396, 2013
PCAWG Drivers and Functional Interpretation Working Group. PCAWG Structural Variation Working Group. PCAWG Consortium Analyses of non-coding somatic drivers in 2,658 cancer …
E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...
Nature 578 (7793), 102-111, 2020
TopicNet: a framework for measuring transcriptional regulatory network change
S Lou, T Li, X Kong, J Zhang, J Liu, D Lee, M Gerstein
Bioinformatics 36 (Supplement_1), i474-i481, 2020
Perspectives on ENCODE
F Abascal, R Acosta, NJ Addleman, J Adrian, V Afzal, B Aken, R Ai, ...
Nature (London) 583 (7818), 2020
Epigenome-based splicing prediction using a recurrent neural network
D Lee, J Zhang, J Liu, M Gerstein
PLoS computational biology 16 (6), e1008006, 2020
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