Prati
Russell B. Davidson
Russell B. Davidson
Potvrđena adresa e-pošte na ornl.gov
Naslov
Citirano
Citirano
Godina
Facile hydrolysis and alcoholysis of palladium acetate
RB Bedford, JG Bowen, RB Davidson, MF Haddow, AE Seymour‐Julen, ...
Angewandte Chemie 127 (22), 6691-6694, 2015
502015
Allostery in the dengue virus NS3 helicase: Insights into the NTPase cycle from molecular simulations
RB Davidson, J Hendrix, BJ Geiss, M McCullagh
PLoS Computational Biology 14 (4), e1006103, 2018
382018
Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2
BC Sanders, S Pokhrel, AD Labbe, II Mathews, CJ Cooper, RB Davidson, ...
Nature communications 14 (1), 1733, 2023
332023
Motif V regulates energy transduction between the flavivirus NS3 ATPase and RNA-binding cleft
KE Du Pont, RB Davidson, M McCullagh, BJ Geiss
Journal of Biological Chemistry 295 (6), 1551-1564, 2020
232020
Hit expansion of a noncovalent SARS-CoV-2 main protease inhibitor
J Glaser, A Sedova, S Galanie, DW Kneller, RB Davidson, E Maradzike, ...
ACS Pharmacology & Translational Science 5 (4), 255-265, 2022
222022
Residue-level allostery propagates through the effective coarse-grained hessian
PT Lake, RB Davidson, H Klem, GM Hocky, M McCullagh
Journal of chemical theory and computation 16 (5), 3385-3395, 2020
192020
Proteome-scale deployment of protein structure prediction workflows on the Summit supercomputer
M Gao, M Coletti, RB Davidson, R Prout, S Abraham, B Hernández, ...
2022 IEEE International Parallel and Distributed Processing Symposium …, 2022
82022
tinyIFD: A High-Throughput Binding Pose Refinement Workflow Through Induced-Fit Ligand Docking
DJ Hsu, RB Davidson, A Sedova, J Glaser
Journal of Chemical Information and Modeling 63 (11), 3438-3447, 2023
72023
Core cysteine residues in the Plasminogen-Apple-Nematode (PAN) domain are critical for HGF/c-MET signaling
D Pal, K De, CM Shanks, K Feng, TB Yates, J Morrell-Falvey, ...
Communications Biology 5 (1), 646, 2022
52022
RNA-dependent structures of the RNA-binding loop in the flavivirus NS3 helicase
RB Davidson, J Hendrix, BJ Geiss, M McCullagh
The Journal of Physical Chemistry B 124 (12), 2371-2381, 2020
52020
Predicted structural proteome of Sphagnum divinum and proteome-scale annotation
RB Davidson, M Coletti, M Gao, B Piatkowski, A Sreedasyam, F Quadir, ...
Bioinformatics 39 (8), btad511, 2023
12023
Modeling protein structures from predicted contacts with modern molecular dynamics potentials: accuracy, sensitivity, and refinement
RB Davidson, M Thavappiragasam, TC Effler, J Woods, DA Elias, ...
Proceedings of the 12th ACM Conference on Bioinformatics, Computational …, 2021
12021
Molecular Allostery in Dengue NS3 Helicase along the ATP Hydrolysis Cycle
RB Davidson, BJ Geiss, M McCullagh
Biophysical Journal 112 (3), 497a, 2017
12017
The coupling of ATP hydrolysis to RNA translocation in dengue virus NS3 helicase: insights from molecular dynamics
M McCullagh, R Davidson
Biophysical Journal 110 (3), 381a, 2016
12016
Structural Models of the Rhodopseudomonas palustris Proteome
RB Davidson, M Coletti, M Gao, A Sedova
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak …, 2023
2023
Structural Models and Sequence Alignment Results of the Desulfovibrio vulgaris Proteome
RB Davidson, M Coletti, M Gao, A Sedova
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak …, 2023
2023
Structural Models and Sequence Alignment Results of the Rhodospirillum rubrum Proteome
RB Davidson, M Coletti, M Gao, A Sedova
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak …, 2023
2023
Structural models and functional annotations for the Sphagnum divinum proteome.
RB Davidson, M Coletti, M Gao, A Sedova
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2023
2023
OpenMDlr: parallel, open-source tools for general protein structure modeling and refinement from pairwise distances
RB Davidson, J Woods, TC Effler, M Thavappiragasam, JC Mitchell, ...
Bioinformatics 38 (12), 3297-3298, 2022
2022
Proteome-scale Structure Prediction Data-Pseudodesulfovibrio mercurii
RB Davidson, M Coletti, M Gao, JM Parks, A Sedova
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2022
2022
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