| Effective anaerobic decolorization of azo dye Acid Orange 7 in continuous upflow packed-bed reactor using biological activated carbon system G Mezohegyi, A Kolodkin, UI Castro, C Bengoa, F Stuber, J Font, ... Industrial & Engineering Chemistry Research 46 (21), 6788-6792, 2007 | 126 | 2007 |
| Systems biology towards life in silico: mathematics of the control of living cells HV Westerhoff, A Kolodkin, R Conradie, SJ Wilkinson, FJ Bruggeman, ... Journal of mathematical biology 58, 7-34, 2009 | 106 | 2009 |
| Macromolecular networks and intelligence in microorganisms HV Westerhoff, AN Brooks, E Simeonidis, R García-Contreras, F He, ... Frontiers in microbiology 5, 379, 2014 | 94 | 2014 |
| ROS networks: designs, aging, Parkinson’s disease and precision therapies A N. Kolodkin, RP Sharma, AM Colangelo, A Ignatenko, F Martorana, ... NPJ systems biology and applications 6 (1), 34, 2020 | 53 | 2020 |
| Emergence of the silicon human and network targeting drugs A Kolodkin, FC Boogerd, N Plant, FJ Bruggeman, V Goncharuk, J Lunshof, ... European Journal of Pharmaceutical Sciences 46 (4), 190-197, 2012 | 50 | 2012 |
| Design principles of nuclear receptor signaling: how complex networking improves signal transduction AN Kolodkin, FJ Bruggeman, N Plant, MJ Moné, BM Bakker, MJ Campbell, ... Molecular Systems Biology 6 (1), 446, 2010 | 47 | 2010 |
| Optimization of stress response through the nuclear receptor-mediated cortisol signalling network A Kolodkin, N Sahin, A Phillips, SR Hood, FJ Bruggeman, HV Westerhoff, ... Nature Communications 4 (1), 1792, 2013 | 28 | 2013 |
| Understanding complexity in neurodegenerative diseases: in silico reconstruction of emergence A Kolodkin, E Simeonidis, R Balling, HV Westerhoff Frontiers in physiology 3, 291, 2012 | 21 | 2012 |
| Development and evaluation of a harmonized whole body physiologically based pharmacokinetic (PBPK) model for flutamide in rats and its extrapolation to humans RP Sharma, V Kumar, M Schuhmacher, A Kolodkin, HV Westerhoff Environmental research 182, 108948, 2020 | 18 | 2020 |
| Functional genomics, proteomics, metabolomics and bioinformatics for systems biology S Ballereau, E Glaab, A Kolodkin, A Chaiboonchoe, M Biryukov, N Vlassis, ... Systems Biology: Integrative Biology and Simulation Tools, 3-41, 2013 | 18 | 2013 |
| Systems biology of regulated exocytosis in pancreatic β-cells B Booß-Bavnbek, J Larsen, E Renström Working Paper, Roskilde, 2008 | 14 | 2008 |
| Advice from a systems-biology model of the corona epidemics HV Westerhoff, AN Kolodkin NPJ systems biology and applications 6 (1), 18, 2020 | 13 | 2020 |
| Computing life: add logos to biology and bios to physics A Kolodkin, E Simeonidis, HV Westerhoff Progress in biophysics and molecular biology 111 (2-3), 69-74, 2013 | 12 | 2013 |
| Parsimony for systems biology: Shaving Occam’s razor away AN Kolodkin, HV Westerhoff European Communications in Mathematical and Theoretical Biology 14, 149-152, 2011 | 11 | 2011 |
| Modeling approaches in systems biology, including silicon cell models AN Kolodkin, FC Boogerd, FJ Bruggeman, HV Westerhoff Systems biology and livestock science, 31-51, 2011 | 9 | 2011 |
| Systems biology through the concept of emergence A Kolodkin Philosophy of Systems Biology: Perspectives from Scientists and Philosophers …, 2017 | 5 | 2017 |
| On different aspects of network analysis in systems biology A Chaiboonchoe, W Jurkowski, J Pellet, E Glaab, A Kolodkin, A Raussel, ... Systems Biology: Integrative Biology and Simulation Tools, 181-207, 2013 | 5 | 2013 |
| From silicon cell to silicon human HV Westerhoff, M Verma, FJ Bruggeman, A Kolodkin, M Swat, N Hayes, ... BetaSys: Systems Biology of Regulated Exocytosis in Pancreatic ß-Cells, 437-458, 2011 | 5 | 2011 |
| Systems Biology in ELIXIR: modelling in the spotlight VM Dos Santos, M Anton, B Szomolay, M Ostaszewski, I Arts, R Benfeitas, ... F1000Research 11, 2022 | 4 | 2022 |
| Sulfolobus systems biology: cool hot design for metabolic pathways T Kouril, A Kolodkin, M Zaparty, R Steuer, P Ruoff, HV Westerhoff, ... Systems Microbiology: Current Topics and Applications, 2012 | 4 | 2012 |
Hans WesterhoffUniversity of Amsterdam, VU University Amsterdam, University of ManchesterVerified email at manchester.ac.uk
