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Wei WANG
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Constructing Markov State Models to elucidate the functional conformational changes of complex biomolecules
W Wang, S Cao, L Zhu, X Huang
Wiley Interdisciplinary Reviews: Computational Molecular Science 8 (1), e1343, 2018
1362018
On the advantages of exploiting memory in Markov state models for biomolecular dynamics
S Cao, A Montoya-Castillo, W Wang, TE Markland, X Huang
The Journal of Chemical Physics 153 (1), 2020
482020
Clustering algorithms to analyze molecular dynamics simulation trajectories for complex chemical and biological systems
J Peng, W Wang, Y Yu, H Gu, X Huang
Chinese Journal of Chemical Physics 31 (4), 404-420, 2018
462018
Adaptive partitioning by local density‐peaks: An efficient density‐based clustering algorithm for analyzing molecular dynamics trajectories
S Liu, L Zhu, FK Sheong, W Wang, X Huang
Journal of Computational Chemistry 38 (3), 152-160, 2017
412017
Role of bacterial RNA polymerase gate opening dynamics in DNA loading and antibiotics inhibition elucidated by quasi-Markov State Model
IC Unarta, S Cao, S Kubo, W Wang, PPH Cheung, X Gao, S Takada, ...
Proceedings of the National Academy of Sciences 118 (17), e2024324118, 2021
352021
An efficient Bayesian kinetic lumping algorithm to identify metastable conformational states via Gibbs sampling
W Wang, T Liang, FK Sheong, X Fan, X Huang
The Journal of Chemical Physics 149 (7), 2018
312018
Microsecond timescale MD simulations at the transition state of Pm HMGR predict remote allosteric residues
TR Quinn, CN Steussy, BE Haines, J Lei, W Wang, FK Sheong, ...
Chemical Science 12 (18), 6413-6418, 2021
102021
RPnet: a reverse-projection-based neural network for coarse-graining metastable conformational states for protein dynamics
H Gu, W Wang, S Cao, IC Unarta, Y Yao, FK Sheong, X Huang
Physical Chemistry Chemical Physics 24 (3), 1462-1474, 2022
62022
Data-driven tight frame for cryo-em image denoising and conformational classification
Y Xian, H Gu, W Wang, X Huang, Y Yao, Y Wang, JF Cai
2018 IEEE Global Conference on Signal and Information Processing (GlobalSIP …, 2018
62018
Conformational selection turns on phenylalanine hydroxylase
KA Konovalov, W Wang, X Huang
Journal of Biological Chemistry 293 (51), 19544-19545, 2018
32018
An Efficient Method to Quantify Structural Distributions in Heterogeneous cryo-EM Datasets
H Gu, W Wang, IC Unarta, W Zeng, FK Sheong, PPH Cheung, S Liu, ...
bioRxiv, 2021.05. 27.446075, 2021
2021
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Articles 1–11