| Benchmark and integration of resources for the estimation of human transcription factor activities L Garcia-Alonso, CH Holland, MM Ibrahim, D Turei, J Saez-Rodriguez Genome research 29 (8), 1363-1375, 2019 | 738 | 2019 |
| OmniPath: guidelines and gateway for literature-curated signaling pathway resources D Türei, T Korcsmáros, J Saez-Rodriguez Nature methods 13 (12), 966-967, 2016 | 526 | 2016 |
| Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data D Dimitrov, D Türei, M Garrido-Rodriguez, PL Burmedi, JS Nagai, C Boys, ... Nature communications 13 (1), 3224, 2022 | 269* | 2022 |
| SignaLink 2–a signaling pathway resource with multi-layered regulatory networks D Fazekas, M Koltai, D Türei, D Módos, M Pálfy, Z Dúl, L Zsákai, ... BMC systems biology 7, 1-15, 2013 | 227 | 2013 |
| Integrated intra‐and intercellular signaling knowledge for multicellular omics analysis D Türei, A Valdeolivas, L Gul, N Palacio‐Escat, M Klein, O Ivanova, ... Molecular systems biology 17 (3), e9923, 2021 | 215 | 2021 |
| Adipocyte-secreted BMP8b mediates adrenergic-induced remodeling of the neuro-vascular network in adipose tissue V Pellegrinelli, VJ Peirce, L Howard, S Virtue, D Türei, M Senzacqua, ... Nature Communications 9 (1), 4974, 2018 | 138 | 2018 |
| The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops D Papp, K Lenti, D Módos, D Fazekas, Z Dúl, D Türei, L Földvári-Nagy, ... FEBS letters 586 (13), 1795-1802, 2012 | 133 | 2012 |
| Complex regulation of autophagy in cancer–Integrated approaches to discover the networks that hold a double-edged sword J Kubisch, D Türei, L Földvári-Nagy, ZA Dunai, L Zsákai, M Varga, T Vellai, ... Seminars in cancer biology 23 (4), 252-261, 2013 | 121 | 2013 |
| The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling A Chiapparino, K Maeda, D Turei, J Saez-Rodriguez, AC Gavin Progress in lipid research 61, 30-39, 2016 | 111 | 2016 |
| Autophagy Regulatory Network—A systems-level bioinformatics resource for studying the mechanism and regulation of autophagy D Türei, L Földvári-Nagy, D Fazekas, D Módos, J Kubisch, T Kadlecsik, ... Autophagy 11 (1), 155-165, 2015 | 98 | 2015 |
| COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Molecular systems biology 17 (10), e10387, 2021 | 87 | 2021 |
| Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities S Müller-Dott, E Tsirvouli, M Vazquez, RO Ramirez Flores, ... Nucleic acids research 51 (20), 10934-10949, 2023 | 58 | 2023 |
| NRF2‐ome: An Integrated Web Resource to Discover Protein Interaction and Regulatory Networks of NRF2 D Türei, D Papp, D Fazekas, L Földvári-Nagy, D Módos, K Lenti, ... Oxidative medicine and cellular longevity 2013 (1), 737591, 2013 | 54 | 2013 |
| Democratizing knowledge representation with BioCypher S Lobentanzer, P Aloy, J Baumbach, B Bohar, VJ Carey, P Charoentong, ... Nature Biotechnology 41 (8), 1056-1059, 2023 | 35 | 2023 |
| Bringing data from curated pathway resources to Cytoscape with OmniPath F Ceccarelli, D Turei, A Gabor, J Saez-Rodriguez Bioinformatics 36 (8), 2632-2633, 2020 | 35 | 2020 |
| Network pharmacology modeling identifies synergistic Aurora B and ZAK interaction in triple-negative breast cancer J Tang, P Gautam, A Gupta, L He, S Timonen, Y Akimov, W Wang, ... NPJ systems biology and applications 5 (1), 20, 2019 | 34* | 2019 |
| Long-term dynamic patterns and diversity of phytoplankton communities in a large eutrophic river (the case of River Danube, Hungary) L Hufnagel, KT Kiss, C Sipkay, L Gimesi, C Vadadi Fülöp, D Türei Applied Ecology and Environmental Research 8 (4), 329-349, 2010 | 34 | 2010 |
| Weed species composition of small‐scale farmlands bears a strong crop‐related and environmental signature K Nagy, A Lengyel, A Kovács, D Türei, AM Csergő, G Pinke Weed Research 58 (1), 46-56, 2018 | 29 | 2018 |
| Targets of drugs are generally and targets of drugs having side effects are specifically good spreaders of human interactome perturbations ÁR Perez-Lopez, KZ Szalay, D Türei, D Módos, K Lenti, T Korcsmáros, ... Scientific reports 5 (1), 10182, 2015 | 29 | 2015 |
| Open community challenge reveals molecular network modules with key roles in diseases S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ... bioRxiv, 265553, 2018 | 28 | 2018 |
Julio Saez RodriguezHeidelberg UniversityVerified email at uni-heidelberg.de
