| Global view of enhancer–promoter interactome in human cells B He, C Chen, L Teng, K Tan Proceedings of the National Academy of Sciences 111 (21), E2191-E2199, 2014 | 282 | 2014 |
| TCF-1 and LEF-1 act upstream of Th-POK to promote the CD4+ T cell fate and interact with Runx3 to silence Cd4 in CD8+ T cells FC Steinke, S Yu, X Zhou, B He, W Yang, B Zhou, H Kawamoto, J Zhu, ... Nature immunology 15 (7), 646-656, 2014 | 173 | 2014 |
| EnhancerAtlas: a resource for enhancer annotation and analysis in 105 human cell/tissue types T Gao, B He, S Liu, H Zhu, K Tan, J Qian Bioinformatics 32 (23), 3543-3551, 2016 | 165 | 2016 |
| 4DGenome: a comprehensive database of chromatin interactions L Teng, B He, J Wang, K Tan Bioinformatics 31 (15), 2560-2564, 2015 | 143 | 2015 |
| A microfluidic device for epigenomic profiling using 100 cells Z Cao, C Chen, B He, K Tan, C Lu Nature methods 12 (10), 959-962, 2015 | 126 | 2015 |
| Developmental trajectory of prehematopoietic stem cell formation from endothelium Q Zhu, P Gao, J Tober, L Bennett, C Chen, Y Uzun, Y Li, ED Howell, ... Blood, The Journal of the American Society of Hematology 136 (7), 845-856, 2020 | 125 | 2020 |
| Functional screen identifies regulators of murine hematopoietic stem cell repopulation P Holmfeldt, M Ganuza, H Marathe, B He, T Hall, G Kang, J Moen, ... Journal of Experimental Medicine 213 (3), 433-449, 2016 | 98 | 2016 |
| CD8+ T cells utilize highly dynamic enhancer repertoires and regulatory circuitry in response to infections B He, S Xing, C Chen, P Gao, L Teng, Q Shan, JA Gullicksrud, MD Martin, ... Immunity 45 (6), 1341-1354, 2016 | 88 | 2016 |
| Identifying topologically associating domains and subdomains by Gaussian Mixture model And Proportion test W Yu, B He, K Tan Nature communications 8 (1), 535, 2017 | 71 | 2017 |
| Identifying noncoding risk variants using disease-relevant gene regulatory networks L Gao, Y Uzun, P Gao, B He, X Ma, J Wang, S Han, K Tan Nature communications 9 (1), 702, 2018 | 59 | 2018 |
| Spatial genome re-organization between fetal and adult hematopoietic stem cells C Chen, W Yu, J Tober, P Gao, B He, K Lee, T Trieu, GA Blobel, NA Speck, ... Cell reports 29 (12), 4200-4211. e7, 2019 | 51 | 2019 |
| Genome-wide studies of the multi-zinc finger Drosophila Suppressor of Hairy-wing protein in the ovary AA Soshnev, B He, RM Baxley, N Jiang, CM Hart, K Tan, PK Geyer Nucleic acids research 40 (12), 5415-5431, 2012 | 49 | 2012 |
| Transcriptional regulatory network controlling the ontogeny of hematopoietic stem cells P Gao, C Chen, ED Howell, Y Li, J Tober, Y Uzun, B He, L Gao, Q Zhu, ... Genes & Development 34 (13-14), 950-964, 2020 | 42 | 2020 |
| Risk variants disrupting enhancers of TH1 and TREG cells in type 1 diabetes P Gao, Y Uzun, B He, SE Salamati, JKM Coffey, E Tsalikian, K Tan Proceedings of the National Academy of Sciences 116 (15), 7581-7590, 2019 | 40 | 2019 |
| Understanding transcriptional regulatory networks using computational models B He, K Tan Current opinion in genetics & development 37, 101-108, 2016 | 40 | 2016 |
| Prostaglandin E1 and its analog misoprostol inhibit human CML stem cell self-renewal via EP4 receptor activation and repression of AP-1 F Li, B He, X Ma, S Yu, RR Bhave, SR Lentz, K Tan, ML Guzman, C Zhao, ... Cell Stem Cell 21 (3), 359-373. e5, 2017 | 37 | 2017 |
| Discover context-specific combinatorial transcription factor interactions by integrating diverse ChIP-Seq data sets L Teng, B He, P Gao, L Gao, K Tan Nucleic acids research 42 (4), e24-e24, 2014 | 25 | 2014 |
| Diverse noncoding mutations contribute to deregulation of cis-regulatory landscape in pediatric cancers B He, P Gao, YY Ding, CH Chen, G Chen, C Chen, H Kim, SK Tasian, ... Science Advances 6 (30), eaba3064, 2020 | 21 | 2020 |
| Efficient hemogenic endothelial cell specification by RUNX1 is dependent on baseline chromatin accessibility of RUNX1-regulated TGFβ target genes ED Howell, AD Yzaguirre, P Gao, R Lis, B He, M Lakadamyali, S Rafii, ... Genes & Development 35 (21-22), 1475-1489, 2021 | 12 | 2021 |
| Signaling pathways and regulation of gene expression in hematopoietic cells D Bogush, J Schramm, Y Ding, B He, C Singh, A Sharma, DB Tukaramrao, ... Advances in Biological Regulation 88, 100942, 2023 | 2 | 2023 |
