Andrew Wen
Cited by
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Clinical concept extraction: a methodology review
S Fu, D Chen, H He, S Liu, S Moon, KJ Peterson, F Shen, L Wang, ...
Journal of biomedical informatics 109, 103526, 2020
Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation
A Wen, S Fu, S Moon, M El Wazir, A Rosenbaum, VC Kaggal, S Liu, ...
NPJ digital medicine 2 (1), 1-7, 2019
Integrating structured and unstructured EHR data using an FHIR-based type system: a case study with medication data
N Hong, A Wen, F Shen, S Sohn, S Liu, H Liu, G Jiang
AMIA Summits on Translational Science Proceedings 2018, 74, 2018
Developing a FHIR-based EHR phenotyping framework: A case study for identification of patients with obesity and multiple comorbidities from discharge summaries
N Hong, A Wen, DJ Stone, S Tsuji, PR Kingsbury, LV Rasmussen, ...
Journal of biomedical informatics 99, 103310, 2019
Developing a scalable FHIR-based clinical data normalization pipeline for standardizing and integrating unstructured and structured electronic health record data
N Hong, A Wen, F Shen, S Sohn, C Wang, H Liu, G Jiang
JAMIA open 2 (4), 570-579, 2019
Utilization of electronic medical records and biomedical literature to support the diagnosis of rare diseases using data fusion and collaborative filtering approaches
F Shen, S Liu, Y Wang, A Wen, L Wang, H Liu
JMIR medical informatics 6 (4), e11301, 2018
HPO2Vec+: Leveraging heterogeneous knowledge resources to enrich node embeddings for the Human Phenotype Ontology
F Shen, S Peng, Y Fan, A Wen, S Liu, Y Wang, L Wang, H Liu
Journal of biomedical informatics 96, 103246, 2019
Developing an FHIR-based computational pipeline for automatic population of case report forms for colorectal cancer clinical trials using electronic health records
N Zong, A Wen, DJ Stone, DK Sharma, C Wang, Y Yu, H Liu, Q Shi, ...
JCO Clinical Cancer Informatics 4, 201-209, 2020
Standardizing heterogeneous annotation corpora using HL7 FHIR for facilitating their reuse and integration in clinical NLP
N Hong, A Wen, MR Mojarad, S Sohn, H Liu, G Jiang
AMIA Annual Symposium Proceedings 2018, 574, 2018
Detecting lifestyle risk factors for chronic kidney disease with comorbidities: association rule mining analysis of web-based survey data
S Peng, F Shen, A Wen, L Wang, Y Fan, X Liu, H Liu
Journal of medical Internet research 21 (12), e14204, 2019
ADEpedia-on-OHDSI: A next generation pharmacovigilance signal detection platform using the OHDSI common data model
Y Yu, KJ Ruddy, N Hong, S Tsuji, A Wen, ND Shah, G Jiang
Journal of biomedical informatics 91, 103119, 2019
An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses
A Wen, L Wang, H He, S Liu, S Fu, S Sohn, JA Kugel, VC Kaggal, ...
Journal of biomedical informatics 113, 103660, 2021
Implementation of a cohort retrieval system for clinical data Repositories using the observational medical outcomes partnership common data model: proof-of-concept system …
S Liu, Y Wang, A Wen, L Wang, N Hong, F Shen, S Bedrick, W Hersh, ...
JMIR medical informatics 8 (10), e17376, 2020
Constructing node embeddings for human phenotype ontology to assist phenotypic similarity measurement
F Shen, S Liu, Y Wang, L Wang, A Wen, AH Limper, H Liu
2018 IEEE International Conference on Healthcare Informatics Workshop (ICHI …, 2018
Drug–target prediction utilizing heterogeneous bio-linked network embeddings
N Zong, RSN Wong, Y Yu, A Wen, M Huang, N Li
Briefings in bioinformatics 22 (1), 568-580, 2021
Test collections for electronic health record-based clinical information retrieval
Y Wang, A Wen, S Liu, W Hersh, S Bedrick, H Liu
JAMIA open 2 (3), 360-368, 2019
Ascertainment of delirium status using natural language processing from electronic health records
S Fu, GS Lopes, SR Pagali, B Thorsteinsdottir, NK LeBrasseur, A Wen, ...
The Journals of Gerontology: Series A 77 (3), 524-530, 2022
Evaluation of patient-level retrieval from electronic health record data for a cohort discovery task
SR Chamberlin, SD Bedrick, AM Cohen, Y Wang, A Wen, S Liu, H Liu, ...
JAMIA open 3 (3), 395-404, 2020
Adapting and evaluating a deep learning language model for clinical why-question answering
A Wen, MY Elwazir, S Moon, J Fan
JAMIA open 3 (1), 16-20, 2020
CQL4NLP: development and integration of FHIR NLP extensions in clinical quality language for EHR-driven phenotyping
A Wen, LV Rasmussen, D Stone, S Liu, R Kiefer, P Adekkanattu, ...
AMIA Summits on Translational Science Proceedings 2021, 624, 2021
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