| Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020 | 256 | 2020 |
| Recent advances in inferring viral diversity from high-throughput sequencing data S Posada-Cespedes, D Seifert, N Beerenwinkel Virus research 239, 17-32, 2017 | 109 | 2017 |
| V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data S Posada-Céspedes, D Seifert, I Topolsky, KP Jablonski, KJ Metzner, ... Bioinformatics 37 (12), 1673-1680, 2021 | 71 | 2021 |
| Detection and genome sequencing of SARS-CoV-2 in a domestic cat with respiratory signs in Switzerland J Klaus, ML Meli, B Willi, S Nadeau, C Beisel, T Stadler, ... Viruses 13 (3), 496, 2021 | 59 | 2021 |
| Viral diversity based on next-generation sequencing of HIV-1 provides precise estimates of infection recency and time since infection LA Carlisle, T Turk, K Kusejko, KJ Metzner, C Leemann, CD Schenkel, ... The Journal of infectious diseases 220 (2), 254-265, 2019 | 34 | 2019 |
| Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data SA Nadeau, TG Vaughan, C Beckmann, I Topolsky, C Chen, E Hodcroft, ... Science translational medicine 15 (680), eabn7979, 2022 | 22 | 2022 |
| Glycosphingolipids are mediators of cancer plasticity through independent signaling pathways C Cumin, YL Huang, C Rossdam, F Ruoff, SP Cespedes, CY Liang, ... Cell Reports 40 (7), 2022 | 22 | 2022 |
| Within-patient genetic diversity of SARS-CoV-2 J Kuipers, AA Batavia, KP Jablonski, F Bayer, N Borgsmüller, A Dondi, ... BioRxiv, 2020 | 22 | 2020 |
| Quantifying SARS-CoV-2 spread in Switzerland based on genomic sequencing data S Nadeau, C Beckmann, I Topolsky, T Vaughan, E Hodcroft, T Schär, ... medRxiv, 2020.10. 14.20212621, 2020 | 12 | 2020 |
| Bioinformatics meets virology: The european virus bioinformatics center’s second annual meeting B Ibrahim, K Arkhipova, AC Andeweg, S Posada-Céspedes, F Enault, ... Viruses 10 (5), 256, 2018 | 10 | 2018 |
| V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput sequencing data S Posada-Céspedes, D Seifert, I Topolsky, KJ Metzner, N Beerenwinkel Bioinformatics, 2020 | 9 | 2020 |
| Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART C Wan, N Bachmann, V Mitov, F Blanquart, SP Céspedes, T Turk, ... Nature communications 11 (1), 5542, 2020 | 7 | 2020 |
| Comparing mutational pathways to lopinavir resistance in HIV-1 subtypes B versus C S Posada-Céspedes, G Van Zyl, H Montazeri, J Kuipers, SY Rhee, ... PLoS computational biology 17 (9), e1008363, 2021 | 4 | 2021 |
| Cell type-focused compound screen in human organoids reveals molecules and pathways controlling cone photoreceptor death SE Spirig, VJ Arteaga-Moreta, Z Raics, S Posada-Céspedes, S Chreng, ... bioRxiv, 2023.10. 09.561525, 2023 | 1 | 2023 |
| Cariotipo del Tití Gris (Saguinus leucopus) Mediante Bandas R-Replicativas S Posada Céspedes, DM Maturana Mena, JB López Ortiz Revista Facultad Nacional de Agronomía Medellín 65 (2), 6729-6737, 2012 | 1 | 2012 |
| High-throughput AAV screening platform on retinal organoids to target cell types for gene therapy J Imbach, T Kleindienst, S Spirig, Z Raics, V Arteaga, Y Hou, ... HUMAN GENE THERAPY 33 (23-24), A40-A41, 2022 | | 2022 |
| Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data (preprint) SA Nadeau, TG Vaughan, C Beckmann, I Topolsky, C Chen, E Hodcroft, ... | | 2021 |
| Quantifying SARS-CoV-2 spread in Switzerland based on genomic sequencing data (preprint) S Nadeau, C Beckmann, I Topolsky, T Vaughan, E Hodcroft, T Schaer, ... | | 2020 |
| Within-patient genetic diversity of SARS-CoV-2 (preprint) J Kuipers, AA Batavia, KP Jablonski, F Bayer, N Borgsmüller, A Dondi, ... | | 2020 |
| Studies in computational biology pertaining to the genetic diversity of HIV-1 S Posada-Céspedes ETH Zurich, 2020 | | 2020 |
Niko BeerenwinkelProfessor of Computational Biology, ETH ZurichPotvrđena adresa e-pošte na bsse.ethz.ch
