CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues J Dundas, Z Ouyang, J Tseng, A Binkowski, Y Turpaz, J Liang Nucleic acids research 34 (suppl_2), W116-W118, 2006 | 1984 | 2006 |
CASTp: computed atlas of surface topography of proteins TA Binkowski, S Naghibzadeh, J Liang Nucleic acids research 31 (13), 3352-3355, 2003 | 897 | 2003 |
A dual function of the CRISPR–Cas system in bacterial antivirus immunity and DNA repair M Babu, N Beloglazova, R Flick, C Graham, T Skarina, B Nocek, ... Molecular microbiology 79 (2), 484-502, 2011 | 354 | 2011 |
Inferring functional relationships of proteins from local sequence and spatial surface patterns TA Binkowski, L Adamian, J Liang Journal of molecular biology 332 (2), 505-526, 2003 | 199 | 2003 |
K-8 learning trajectories derived from research literature: Sequence, repetition, conditionals KM Rich, C Strickland, TA Binkowski, C Moran, D Franklin Proceedings of the 2017 ACM conference on international computing education …, 2017 | 144 | 2017 |
Structure of apo-and monometalated forms of NDM-1—a highly potent carbapenem-hydrolyzing metallo-β-lactamase Y Kim, C Tesar, J Mire, R Jedrzejczak, A Binkowski, G Babnigg, ... PloS one 6 (9), e24621, 2011 | 144 | 2011 |
topoSNP: a topographic database of non‐synonymous single nucleotide polymorphisms with and without known disease association NO Stitziel, TA Binkowski, YY Tseng, S Kasif, J Liang Nucleic acids research 32 (suppl_1), D520-D522, 2004 | 126 | 2004 |
Large-scale evaluation of protein reductive methylation for improving protein crystallization Y Kim, P Quartey, H Li, L Volkart, C Hatzos, C Chang, B Nocek, M Cuff, ... Nature methods 5 (10), 853-854, 2008 | 114 | 2008 |
pvSOAR: detecting similar surface patterns of pocket and void surfaces of amino acid residues on proteins TA Binkowski, P Freeman, J Liang Nucleic Acids Research 32 (suppl_2), W555-W558, 2004 | 93 | 2004 |
Structure of surface layer homology (SLH) domains from Bacillus anthracis surface array protein J Kern, R Wilton, R Zhang, TA Binkowski, A Joachimiak, O Schneewind Journal of Biological Chemistry 286 (29), 26042-26049, 2011 | 88 | 2011 |
Protein surface analysis for function annotation in high‐throughput structural genomics pipeline TA Binkowski, A Joachimiak, J Liang Protein Science 14 (12), 2972-2981, 2005 | 87 | 2005 |
Protein functional surfaces: global shape matching and local spatial alignments of ligand binding sites TA Binkowski, A Joachimiak BMC structural biology 8, 1-23, 2008 | 79 | 2008 |
A K-8 debugging learning trajectory derived from research literature KM Rich, C Strickland, TA Binkowski, D Franklin Proceedings of the 50th ACM technical symposium on computer science …, 2019 | 71 | 2019 |
Higher-order interhelical spatial interactions in membrane proteins L Adamian, R Jackups Jr, TA Binkowski, J Liang Journal of Molecular Biology 327 (1), 251-272, 2003 | 68 | 2003 |
Decomposition: A K-8 computational thinking learning trajectory KM Rich, TA Binkowski, C Strickland, D Franklin Proceedings of the 2018 ACM conference on international computing education …, 2018 | 60 | 2018 |
Structure of transcription factor HetR required for heterocyst differentiation in cyanobacteria Y Kim, G Joachimiak, Z Ye, TA Binkowski, R Zhang, P Gornicki, ... Proceedings of the National Academy of Sciences 108 (25), 10109-10114, 2011 | 57 | 2011 |
Biochemical and structural characterization of a novel family of cystathionine β-synthase domain proteins fused to a Zn ribbon-like domain M Proudfoot, SA Sanders, A Singer, R Zhang, G Brown, A Binkowski, L Xu, ... Journal of molecular biology 375 (1), 301-315, 2008 | 53 | 2008 |
Bacillus anthracis Inosine 5′-Monophosphate Dehydrogenase in Action: The First Bacterial Series of Structures of Phosphate Ion-, Substrate-, and Product-Bound … M Makowska-Grzyska, Y Kim, R Wu, R Wilton, DR Gollapalli, XK Wang, ... Biochemistry 51 (31), 6148-6163, 2012 | 42 | 2012 |
The 1.38 Å crystal structure of DmsD protein from Salmonella typhimurium, a proofreading chaperone on the Tat pathway Y Qiu, R Zhang, TA Binkowski, V Tereshko, A Joachimiak, A Kossiakoff Proteins: Structure, Function, and Bioinformatics 71 (2), 525-533, 2008 | 38 | 2008 |
Predicting HLA class I non-permissive amino acid residues substitutions TA Binkowski, SR Marino, A Joachimiak Public Library of Science 7 (8), e41710, 2012 | 36 | 2012 |