Hanchuan Peng
Hanchuan Peng
Allen Institute for Brain Science
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Feature selection based on mutual information criteria of max-dependency, max-relevance, and min-redundancy
H Peng, F Long, C Ding
IEEE Transactions on pattern analysis and machine intelligence 27 (8), 1226-1238, 2005
Minimum redundancy feature selection from microarray gene expression data
C Ding, H Peng
Journal of bioinformatics and computational biology 3 (02), 185-205, 2005
A mesoscale connectome of the mouse brain
SW Oh, JA Harris, L Ng, B Winslow, N Cain, S Mihalas, Q Wang, C Lau, ...
Nature 508 (7495), 207-214, 2014
A GAL4-driver line resource for Drosophila neurobiology
A Jenett, GM Rubin, TTB Ngo, D Shepherd, C Murphy, H Dionne, ...
Cell reports 2 (4), 991-1001, 2012
V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets
H Peng, Z Ruan, F Long, JH Simpson, EW Myers
Nature biotechnology 28 (4), 348-353, 2010
Biological imaging software tools
KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ...
Nature methods 9 (7), 697-710, 2012
Bioimage informatics: a new area of engineering biology
H Peng
Bioinformatics 24 (17), 1827-1836, 2008
Classification of electrophysiological and morphological neuron types in the mouse visual cortex
NW Gouwens, SA Sorensen, J Berg, C Lee, T Jarsky, J Ting, SM Sunkin, ...
Nature neuroscience 22 (7), 1182-1195, 2019
Integrated morphoelectric and transcriptomic classification of cortical GABAergic cells
NW Gouwens, SA Sorensen, F Baftizadeh, A Budzillo, BR Lee, T Jarsky, ...
Cell 183 (4), 935-953. e19, 2020
Extensible visualization and analysis for multidimensional images using Vaa3D
H Peng, A Bria, Z Zhou, G Iannello, F Long
Nature protocols 9 (1), 193-208, 2014
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
mGRASP enables mapping mammalian synaptic connectivity with light microscopy
J Kim, T Zhao, RS Petralia, Y Yu, H Peng, E Myers, JC Magee
Nature methods 9 (1), 96-102, 2012
Evolving feature selection
H Liu, ER Dougherty, JG Dy, K Torkkola, E Tuv, H Peng, C Ding, F Long, ...
IEEE Intelligent systems 20 (6), 64-76, 2005
BigNeuron: large-scale 3D neuron reconstruction from optical microscopy images
H Peng, M Hawrylycz, J Roskams, S Hill, N Spruston, E Meijering, ...
Neuron 87 (2), 252-256, 2015
Morphological diversity of single neurons in molecularly defined cell types
H Peng, P Xie, L Liu, X Kuang, Y Wang, L Qu, H Gong, S Jiang, A Li, ...
Nature 598 (7879), 174-181, 2021
A 3D digital atlas of C. elegans and its application to single-cell analyses
F Long, H Peng, X Liu, SK Kim, E Myers
Nature methods 6 (9), 667-672, 2009
APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree
H Xiao, H Peng
Bioinformatics 29 (11), 1448-1454, 2013
Imagining the future of bioimage analysis
E Meijering, AE Carpenter, H Peng, FA Hamprecht, JC Olivo-Marin
Nature biotechnology 34 (12), 1250-1255, 2016
Human neocortical expansion involves glutamatergic neuron diversification
J Berg, SA Sorensen, JT Ting, JA Miller, T Chartrand, A Buchin, ...
Nature 598 (7879), 151-158, 2021
BrainAligner: 3D registration atlases of Drosophila brains
H Peng, P Chung, F Long, L Qu, A Jenett, AM Seeds, EW Myers, ...
Nature methods 8 (6), 493-498, 2011
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