Barbara Holland

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David PennyProfessor of theoretical Biology, Massey UniversityVerified email at massey.ac.nz
Jan SchmidFerguson Street LaboratoriesVerified email at massey.ac.nz
Jeremy G SumnerUniversity of TasmaniaVerified email at utas.edu.au
Michael HendyProfessor, Mathematics, Otago UniversityVerified email at maths.otago.ac.nz
Richard David CannonUniversity of OtagoVerified email at otago.ac.nz
Craig MillarSchool of Biological Sciences, The University of AucklandVerified email at auckland.ac.nz
Nigel FrenchDistinguished Professor of Infectious Disease Epidemiology and Public Health, Massey University.Verified email at massey.ac.nz
David M LambertAustralian Research Centre for Human Evolution, Griffith University, AustraliaVerified email at griffith.edu.au
Malgorzata O'ReillyUniversity of TasmaniaVerified email at utas.edu.au
Ningxin ZhangMassey University, New ZealandVerified email at massey.ac.nz
Peter lockhartMassey universityVerified email at massey.ac.nz
Michael WoodhamsUniversity of TasmaniaVerified email at utas.edu.au
greg jordanProfessor, Biological Sciences, University of TasmaniaVerified email at utas.edu.au
Michael CharlestonUniversity of TasmaniaVerified email at utas.edu.au
R* VaillancourtTasmania OR Cornell or SaskatchewanVerified email at utas.edu.au
Rebecca JonesSchool of Plant Science, University of TasmaniaVerified email at utas.edu.au
Jeremy AustinAustralian Centre for Ancient DNA, University of AdelaideVerified email at adelaide.edu.au
Christopher BurridgeSchool of Zoology, University of TasmaniaVerified email at utas.edu.au
Menna JonesAustralian Research Council Future Fellow, University of TasmaniaVerified email at utas.edu.au
Lars S JermiinHonorary Professor, Australian National UniversityVerified email at anu.edu.au

Barbara Holland

School of Natural Sciences (Maths), University of Tasmania, Hobart

Verified email at utas.edu.au - Homepage

Phylogenetic methods evolutionary networks models of sequence evolution


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Rates of evolution in ancient DNA from Adelie penguins DM Lambert, PA Ritchie, CD Millar, B Holland, AJ Drummond, C Baroni Science 295 (5563), 2270-2273, 2002	367	2002
Using consensus networks to visualize contradictory evidence for species phylogeny BR Holland, KT Huber, V Moulton, PJ Lockhart Molecular biology and evolution 21 (7), 1459-1461, 2004	209	2004
Molecular Epidemiology of Campylobacter jejuni Isolates from Wild-Bird Fecal Material in Children's Playgrounds NP French, A Midwinter, B Holland, J Collins-Emerson, R Pattison, ... Applied and Environmental Microbiology 75 (3), 779-783, 2009	195	2009
δ plots: a tool for analyzing phylogenetic distance data BR Holland, KT Huber, A Dress, V Moulton Molecular biology and evolution 19 (12), 2051-2059, 2002	187	2002
Analysis of Acorus calamus Chloroplast Genome and Its Phylogenetic Implications VV Goremykin, B Holland, KI Hirsch-Ernst, FH Hellwig Molecular biology and evolution 22 (9), 1813-1822, 2005	180	2005
Consensus networks: a method for visualising incompatibilities in collections of trees B Holland, V Moulton International workshop on algorithms in bioinformatics, 165-176, 2003	179	2003
Outgroup misplacement and phylogenetic inaccuracy under a molecular clock—a simulation study BR Holland, D Penny, MD Hendy Systematic biology 52 (2), 229-238, 2003	165	2003
GHOST: recovering historical signal from heterotachously evolved sequence alignments SM Crotty, BQ Minh, NG Bean, BR Holland, J Tuke, LS Jermiin, ... Systematic biology 69 (2), 249-264, 2020	164	2020
Optimizing automated AFLP scoring parameters to improve phylogenetic resolution BR Holland, AC Clarke, HM Meudt Systematic Biology 57 (3), 347-366, 2008	152	2008
Multiple maxima of likelihood in phylogenetic trees: an analytic approach B Chor, MD Hendy, BR Holland, D Penny Proceedings of the fourth annual international conference on Computational …, 2000	140	2000
Using supernetworks to distinguish hybridization from lineage-sorting BR Holland, S Benthin, PJ Lockhart, V Moulton, KT Huber BMC Evolutionary Biology 8, 1-11, 2008	132	2008
Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences AF Auch, SR Henz, BR Holland, M Göker BMC bioinformatics 7, 1-16, 2006	113	2006
Deciphering past human population movements in Oceania: provably optimal trees of 127 mtDNA genomes MJ Pierson, R Martinez-Arias, BR Holland, NJ Gemmell, ME Hurles, ... Molecular biology and evolution 23 (10), 1966-1975, 2006	107	2006
Sixty alleles of the ALS7 open reading frame in Candida albicans: ALS7 is a hypermutable contingency locus N Zhang, AL Harrex, BR Holland, LE Fenton, RD Cannon, J Schmid Genome Research 13 (9), 2005-2017, 2003	95	2003
Extensive population decline in the Tasmanian devil predates European settlement and devil facial tumour disease A Brüniche-Olsen, ME Jones, JJ Austin, CP Burridge, BR Holland Biology letters 10 (11), 20140619, 2014	92	2014
The problem of rooting rapid radiations L Shavit, D Penny, MD Hendy, BR Holland Molecular biology and evolution 24 (11), 2400-2411, 2007	87	2007
Heterozygosity and functional allelic variation in the Candida albicans efflux pump genes CDR1 and CDR2 AR Holmes, S Tsao, SW Ong, E Lamping, K Niimi, BC Monk, M Niimi, ... Molecular microbiology 62 (1), 170-186, 2006	84	2006
Is the general time-reversible model bad for molecular phylogenetics? JG Sumner, PD Jarvis, J Fernández-Sánchez, BT Kaine, MD Woodhams, ... Systematic biology 61 (6), 1069-1074, 2012	81	2012
Geochemical anatomy of silica iron exhalites: evidence for hydrothermal oxyanion cycling in response to vent fluid redox and thermal evolution (Mt. Windsor Subprovince, Australia) GJ Davidson, AJ Stolz, SM Eggins Economic Geology 96 (5), 1201-1226, 2001	81*	2001
Untangling long branches: identifying conflicting phylogenetic signals using spectral analysis, neighbor-net, and consensus networks M Kennedy, BR Holland, RD Gray, HG Spencer Systematic Biology 54 (4), 620-633, 2005	78	2005

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