Prati
Paul Jenkins
Paul Jenkins
Departments of Statistics & Computer Science, University of Warwick
Potvrđena adresa e-pošte na warwick.ac.uk
Naslov
Citirano
Citirano
Godina
Genome-wide fine-scale recombination rate variation in Drosophila melanogaster
AH Chan, PA Jenkins, YS Song
PLoS Genetics 8 (12), e1003090, 2012
2862012
A likelihood-free inference framework for population genetic data using exchangeable neural networks
J Chan, V Perrone, J Spence, P Jenkins, S Mathieson, Y Song
Advances in neural information processing systems 31, 2018
1152018
Poisson random fields for dynamic feature models
V Perrone, PA Jenkins, D Spano, YW Teh
The Journal of Machine Learning Research, 2017
652017
Exact simulation of the Wright–Fisher diffusion
PA Jenkins, D Spano
Annals of Applied Probability 27 (3), 1478-1509, 2017
642017
Ongoing recombination in SARS-CoV-2 revealed through genealogical reconstruction
A Ignatieva, J Hein, PA Jenkins
Molecular Biology and Evolution 39 (2), msac028, 2022
502022
Importance sampling and the two-locus model with subdivided population structure
RC Griffiths, PA Jenkins, YS Song
Advances in applied probability 40 (2), 473, 2008
442008
General triallelic frequency spectrum under demographic models with variable population size
PA Jenkins, JW Mueller, YS Song
Genetics 196 (1), 295-311, 2014
372014
The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele
PA Jenkins, YS Song
Theoretical population biology 80 (2), 158-173, 2011
372011
An asymptotic sampling formula for the coalescent with recombination
PA Jenkins, YS Song
The annals of applied probability: an official journal of the Institute of …, 2010
282010
Closed-form two-locus sampling distributions: accuracy and universality
PA Jenkins, YS Song
Genetics 183 (3), 1087-1103, 2009
242009
Tractable diffusion and coalescent processes for weakly correlated loci
PA Jenkins, P Fearnhead, YS Song
Electronic journal of probability 20, 2015
21*2015
Asymptotic genealogies of interacting particle systems with an application to sequential Monte Carlo
J Koskela, PA Jenkins, AM Johansen, D Spano
202020
Computational inference beyond Kingman's coalescent
J Koskela, P Jenkins, D Spano
Journal of Applied Probability 52 (2), 519-537, 2015
202015
Padé approximants and exact two-locus sampling distributions
PA Jenkins, YS Song
The Annals of Applied Probability 22 (2), 576-607, 2012
202012
KwARG: parsimonious reconstruction of ancestral recombination graphs with recurrent mutation
A Ignatieva, RB Lyngsø, PA Jenkins, J Hein
Bioinformatics 37 (19), 3277-3284, 2021
192021
Inference from samples of DNA sequences using a two-locus model
PA Jenkins, RC Griffiths
Journal of Computational Biology 18 (1), 109-127, 2011
192011
A coalescent dual process for a Wright–Fisher diffusion with recombination and its application to haplotype partitioning
RC Griffiths, PA Jenkins, S Lessard
Theoretical population biology 112, 126-138, 2016
172016
Consistency of Bayesian nonparametric inference for discretely observed jump diffusions
J Koskela, D Spano, PA Jenkins
122019
Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection
K Dialdestoro, JA Sibbesen, L Maretty, J Raghwani, A Gall, P Kellam, ...
Genetics 202 (4), 1449-1472, 2016
122016
Evidence of ongoing recombination in SARS-CoV-2 through genealogical reconstruction
A Ignatieva, J Hein, PA Jenkins
BioRxiv, 2021.01. 21.427579, 2021
112021
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