| Ensembl 2008 P Flicek, BL Aken, K Beal, B Ballester, M Caccamo, Y Chen, L Clarke, ... Nucleic Acids Research 36, 2008 | 2917* | 2008 |
| JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ... Nucleic acids research 46 (D1), D260-D266, 2018 | 1572 | 2018 |
| JASPAR 2020: update of the open-access database of transcription factor binding profiles O Fornes, JA Castro-Mondragon, A Khan, R Van der Lee, X Zhang, ... Nucleic acids research 48 (D1), D87-D92, 2020 | 1570 | 2020 |
| Ensembl 2009 TJP Hubbard, BL Aken, S Ayling, B Ballester, K Beal, E Bragin, S Brent, ... Nucleic acids research 37 (suppl_1), D690-D697, 2009 | 968 | 2009 |
| Ensembl 2007 TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ... Nucleic acids research 35 (suppl_1), D610-D617, 2007 | 958 | 2007 |
| BioMart–biological queries made easy D Smedley, S Haider, B Ballester, R Holland, D London, G Thorisson, ... BMC genomics 10 (1), 1-12, 2009 | 901 | 2009 |
| Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding D Schmidt, MD Wilson, B Ballester, PC Schwalie, GD Brown, A Marshall, ... Science 328 (5981), 1036-1040, 2010 | 827 | 2010 |
| JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles JA Castro-Mondragon, R Riudavets-Puig, I Rauluseviciute, ... Nucleic acids research 50 (D1), D165-D173, 2022 | 791 | 2022 |
| Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages D Schmidt, PC Schwalie, MD Wilson, B Ballester, Â Gonçalves, C Kutter, ... Cell 148 (1), 335-348, 2012 | 613 | 2012 |
| BioMart Central Portal—unified access to biological data S Haider, B Ballester, D Smedley, J Zhang, P Rice, A Kasprzyk Nucleic acids research 37 (suppl_2), W23-W27, 2009 | 405 | 2009 |
| Ensembl's 10th year P Flicek, BL Aken, B Ballester, K Beal, E Bragin, S Brent, Y Chen, ... Nucleic acids research 38 (suppl_1), D557-D562, 2010 | 368 | 2010 |
| ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments J Chèneby, M Gheorghe, M Artufel, A Mathelier, B Ballester Nucleic acids research 46 (D1), D267-D275, 2018 | 221 | 2018 |
| Gene expression profiling identifies molecular subgroups among nodal peripheral T-cell lymphomas B Ballester, O Ramuz, C Gisselbrecht, G Doucet, L Loi, B Loriod, ... Oncogene 25 (10), 1560-1570, 2006 | 168 | 2006 |
| The chromatin environment shapes DNA replication origin organization and defines origin classes C Cayrou, B Ballester, I Peiffer, R Fenouil, P Coulombe, JC Andrau, ... Genome research 25 (12), 1873-1885, 2015 | 160 | 2015 |
| High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq L Vanhille, A Griffon, MA Maqbool, J Zacarias-Cabeza, LTM Dao, ... Nature communications 6 (1), 6905, 2015 | 144 | 2015 |
| ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments F Hammal, P de Langen, A Bergon, F Lopez, B Ballester Nucleic acids research 50 (D1), D316-D325, 2022 | 131 | 2022 |
| ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments J Chèneby, Z Ménétrier, M Mestdagh, T Rosnet, A Douida, W Rhalloussi, ... Nucleic acids research 48 (D1), D180-D188, 2020 | 130 | 2020 |
| Integrative analysis of public ChIP-seq experiments reveals a complex multi-cell regulatory landscape A Griffon, Q Barbier, J Dalino, J van Helden, S Spicuglia, B Ballester Nucleic acids research 43 (4), e27-e27, 2015 | 128 | 2015 |
| Involvement of G-quadruplex regions in mammalian replication origin activity P Prorok, M Artufel, A Aze, P Coulombe, I Peiffer, L Lacroix, A Guédin, ... Nature communications 10 (1), 3274, 2019 | 124 | 2019 |
| Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways B Ballester, A Medina-Rivera, D Schmidt, M Gonzàlez-Porta, M Carlucci, ... Elife 3, e02626, 2014 | 109 | 2014 |
Paul FlicekThe Jackson Laboratory, University of CambridgeVerified email at jax.org
