Michael Hackenberg
Michael Hackenberg
Potvrđena adresa e-pošte na ugr.es
NaslovCitiranoGodina
miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments
M Hackenberg, M Sturm, D Langenberger, JM Falcon-Perez, AM Aransay
Nucleic acids research 37 (suppl_2), W68-W76, 2009
3022009
Nontemplated nucleotide additions distinguish the small RNA composition in cells from exosomes
D Koppers-Lalic, M Hackenberg, IV Bijnsdorp, MAJ van Eijndhoven, ...
Cell reports 8 (6), 1649-1658, 2014
2862014
miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments
M Hackenberg, N Rodríguez-Ezpeleta, AM Aransay
Nucleic acids research 39 (suppl_2), W132-W138, 2011
2482011
CpGcluster: a distance-based algorithm for CpG-island detection
M Hackenberg, C Previti, PL Luque-Escamilla, P Carpena, ...
BMC bioinformatics 7 (1), 446, 2006
1842006
TargetSpy: a supervised machine learning approach for microRNA target prediction
M Sturm, M Hackenberg, D Langenberger, D Frishman
BMC bioinformatics 11 (1), 292, 2010
1512010
sRNAtoolbox: an integrated collection of small RNA research tools
A Rueda, G Barturen, R Lebrón, C Gómez-Martín, Á Alganza, JL Oliver, ...
Nucleic acids research 43 (W1), W467-W473, 2015
1232015
IsoFinder: computational prediction of isochores in genome sequences
JL Oliver, P Carpena, M Hackenberg, P Bernaola-Galván
Nucleic acids research 32 (suppl_2), W287-W292, 2004
902004
Surface analysis of Dicrocoelium dendriticum. The molecular characterization of exosomes reveals the presence of miRNAs
D Bernal, M Trelis, S Montaner, F Cantalapiedra, A Galiano, ...
Journal of proteomics 105, 232-241, 2014
872014
Differential expression of micro RNA s and other small RNA s in barley between water and drought conditions
M Hackenberg, P Gustafson, P Langridge, BJ Shi
Plant biotechnology journal 13 (1), 2-13, 2015
852015
A comprehensive expression profile of microRNAs and other classes of non-coding small RNAs in barley under phosphorous-deficient and-sufficient conditions
M Hackenberg, POJ Huang, CY Huang, BUJUN Shi, P Gustafson, ...
DNA research 20 (2), 109-125, 2012
772012
Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions
M Hackenberg, BJ Shi, P Gustafson, P Langridge
BMC plant biology 13 (1), 214, 2013
682013
Isochore chromosome maps of the human genome
JL Oliver, P Carpena, R Román-Roldán, T Mata-Balaguer, ...
Gene 300 (1-2), 117-127, 2002
682002
Sensing of latent EBV infection through exosomal transfer of 5′ pppRNA
SR Baglio, MAJ van Eijndhoven, D Koppers-Lalic, J Berenguer, ...
Proceedings of the National Academy of Sciences 113 (5), E587-E596, 2016
672016
Level statistics of words: Finding keywords in literary texts and symbolic sequences
P Carpena, P Bernaola-Galván, M Hackenberg, AV Coronado, JL Oliver
Physical Review E 79 (3), 035102, 2009
672009
sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments
G Barturen, A Rueda, M Hamberg, A Alganza, R Lebron, M Kotsyfakis, ...
Methods in Next Generation Sequencing 1 (1), 21-31, 2014
582014
NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data
M Hackenberg, G Barturen, JL Oliver
Nucleic acids research 39 (suppl_1), D75-D79, 2010
512010
Non-invasive prostate cancer detection by measuring miRNA variants (isomiRs) in urine extracellular vesicles
D Koppers-Lalic, M Hackenberg, R De Menezes, B Misovic, M Wachalska, ...
Oncotarget 7 (16), 22566, 2016
502016
A systems level analysis reveals transcriptomic and proteomic complexity in Ixodes ricinus midgut and salivary glands during early attachment and feeding
A Schwarz, S Tenzer, M Hackenberg, J Erhart, A Gerhold-Ay, J Mazur, ...
Molecular & Cellular Proteomics 13 (10), 2725-2735, 2014
492014
Prediction of CpG-island function: CpG clustering vs. sliding-window methods
M Hackenberg, G Barturen, P Carpena, PL Luque-Escamilla, C Previti, ...
BMC genomics 11 (1), 327, 2010
492010
Identifying characteristic scales in the human genome
P Carpena, P Bernaola-Galván, AV Coronado, M Hackenberg, JL Oliver
Physical Review E 75 (3), 032903, 2007
492007
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