Prati
Chaok Seok
Chaok Seok
Potvrđena adresa e-pošte na snu.ac.kr - Početna stranica
Naslov
Citirano
Citirano
Godina
GalaxyRefine: Protein structure refinement driven by side-chain repacking
L Heo, H Park, C Seok
Nucleic acids research 41 (W1), W384-W388, 2013
5312013
Use of the weighted histogram analysis method for the analysis of simulated and parallel tempering simulations
JD Chodera, WC Swope, JW Pitera, C Seok, KA Dill
Journal of Chemical Theory and Computation 3 (1), 26-41, 2007
4872007
GalaxyWEB server for protein structure prediction and refinement
J Ko, H Park, L Heo, C Seok
Nucleic acids research 40 (W1), W294-W297, 2012
4412012
Using quaternions to calculate RMSD
EA Coutsias, C Seok, KA Dill
Journal of computational chemistry 25 (15), 1849-1857, 2004
3812004
A kinematic view of loop closure
EA Coutsias, C Seok, MP Jacobson, KA Dill
Journal of computational chemistry 25 (4), 510-528, 2004
2862004
Pulsating tubules from noncovalent macrocycles
Z Huang, SK Kang, M Banno, T Yamaguchi, D Lee, C Seok, E Yashima, ...
Science 337 (6101), 1521-1526, 2012
2562012
GalaxyPepDock: a protein–peptide docking tool based on interaction similarity and energy optimization
H Lee, L Heo, MS Lee, C Seok
Nucleic acids research 43 (W1), W431-W435, 2015
1862015
Developing a fully glycosylated full-length SARS-CoV-2 spike protein model in a viral membrane
H Woo, SJ Park, YK Choi, T Park, M Tanveer, Y Cao, NR Kern, J Lee, ...
The journal of physical chemistry B 124 (33), 7128-7137, 2020
1572020
Community-wide assessment of protein-interface modeling suggests improvements to design methodology
SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ...
Journal of molecular biology 414 (2), 289-302, 2011
1462011
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
1432016
Prediction of protein structure and interaction by GALAXY protein modeling programs
WH Shin, GR Lee, L Heo, H Lee, C Seok
Bio Design 2 (1), 1-11, 2014
1362014
Protein loop modeling by using fragment assembly and analytical loop closure
J Lee, D Lee, H Park, EA Coutsias, C Seok
Proteins: Structure, Function, and Bioinformatics 78 (16), 3428-3436, 2010
1122010
Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions
R Moretti, SJ Fleishman, R Agius, M Torchala, PA Bates, PL Kastritis, ...
Proteins: Structure, Function, and Bioinformatics 81 (11), 1980-1987, 2013
1002013
The FALC-Loop web server for protein loop modeling
J Ko, D Lee, H Park, EA Coutsias, J Lee, C Seok
Nucleic acids research 39 (suppl_2), W210-W214, 2011
932011
GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions
J Ko, H Park, C Seok
BMC bioinformatics 13 (1), 1-8, 2012
892012
The flexibility in the proline ring couples to the protein backbone
BK Ho, EA Coutsias, C Seok, KA Dill
Protein Science 14 (4), 1011-1018, 2005
842005
GalaxyHomomer: a web server for protein homo-oligomer structure prediction from a monomer sequence or structure
M Baek, T Park, L Heo, C Park, C Seok
Nucleic acids research 45 (W1), W320-W324, 2017
832017
GalaxySite: ligand-binding-site prediction by using molecular docking
L Heo, WH Shin, MS Lee, C Seok
Nucleic acids research 42 (W1), W210-W214, 2014
822014
Self‐Dissociating Tubules from Helical Stacking of Noncovalent Macrocycles
HJ Kim, SK Kang, YK Lee, C Seok, JK Lee, WC Zin, M Lee
Angewandte Chemie 122 (45), 8649-8653, 2010
812010
GalaxyRefineComplex: Refinement of protein-protein complex model structures driven by interface repacking
L Heo, H Lee, C Seok
Scientific reports 6 (1), 1-10, 2016
752016
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