Antonio Rueda
Antonio Rueda
Genomics England
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Cited by
Cited by
The 100 000 Genomes Project: bringing whole genome sequencing to the NHS
C Turnbull, RH Scott, E Thomas, L Jones, N Murugaesu, FB Pretty, ...
Bmj 361, 2018
sRNAtoolbox: an integrated collection of small RNA research tools
A Rueda, G Barturen, R Lebrón, C Gómez-Martín, Á Alganza, JL Oliver, ...
Nucleic acids research 43 (W1), W467-W473, 2015
sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments
G Barturen, A Rueda, M Hamberg, A Alganza, R Lebron, M Kotsyfakis, ...
Methods in Next Generation Sequencing 1 (1), 21-31, 2014
PanelApp crowdsources expert knowledge to establish consensus diagnostic gene panels
AR Martin, E Williams, RE Foulger, S Leigh, LC Daugherty, O Niblock, ...
Nature genetics 51 (11), 1560-1565, 2019
267 Spanish exomes reveal population-specific differences in disease-related genetic variation
J Dopazo, A Amadoz, M Bleda, L Garcia-Alonso, A Alemán, ...
Molecular biology and evolution 33 (5), 1205-1218, 2016
Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq)
J Lagarde, B Uszczynska-Ratajczak, J Santoyo-Lopez, JM Gonzalez, ...
Nature communications 7 (1), 1-11, 2016
sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression
E Aparicio-Puerta, R Lebrón, A Rueda, C Gómez-Martín, S Giannoukakos, ...
Nucleic acids research 47 (W1), W530-W535, 2019
MethylExtract: high-quality methylation maps and SNV calling from whole genome bisulfite sequencing data
G Barturen, A Rueda, JL Oliver, M Hackenberg
F1000Research 2, 2013
Clustering of DNA words and biological function: a proof of principle
M Hackenberg, A Rueda, P Carpena, P Bernaola-Galván, G Barturen, ...
Journal of theoretical biology 297, 127-136, 2012
Evolution of the Quorum network and the mobilome (plasmids and bacteriophages) in clinical strains of Acinetobacter baumannii during a decade
M López, A Rueda, JP Florido, L Blasco, L Fernández-García, R Trastoy, ...
Scientific reports 8 (1), 1-15, 2018
Deciphering intrafamilial phenotypic variability by exome sequencing in a Bardet–Biedl family
M González‐del Pozo, C Méndez‐Vidal, J Santoyo‐Lopez, A Vela‐Boza, ...
Molecular genetics & genomic medicine 2 (2), 124-133, 2014
DNA clustering and genome complexity
F Dios, G Barturen, R Lebrón, A Rueda, M Hackenberg, JL Oliver
Computational biology and chemistry 53, 71-78, 2014
ngsCAT: a tool to assess the efficiency of targeted enrichment sequencing
FJ López-Domingo, JP Florido, A Rueda, J Dopazo, J Santoyo-Lopez
Bioinformatics 30 (12), 1767-1768, 2014
Genomic evolution of two Acinetobacter baumannii clinical strains from ST-2 clones isolated in 2000 and 2010 (ST-2_clon_2000 and ST-2_clon_2010)
M López, A Rueda, JP Florido, L Blasco, E Gato, L Fernández-García, ...
Genome announcements 4 (5), e01182-16, 2016
HGVA: the Human Genome Variation Archive
J Lopez, J Coll, M Haimel, S Kandasamy, J Tarraga, P Furio-Tari, W Bari, ...
Nucleic acids research 45 (W1), W189-W194, 2017
Generation of different sizes and classes of small RNAs in barley is locus, chromosome and/or cultivar-dependent
M Hackenberg, A Rueda, P Gustafson, P Langridge, BJ Shi
BMC genomics 17 (1), 1-11, 2016
100,000 genomes project: Integrating whole genome sequencing (WGS) data into clinical practice
A Sosinsky, J Ambrose, M Zarowiecki, J Mitchell, S Henderson, ...
Annals of Oncology 30, vii1, 2019
sRNAtoolboxVM: small RNA analysis in a virtual machine
C Gómez-Martín, R Lebrón, A Rueda, JL Oliver, M Hackenberg
MicroRNA Detection and Target Identification, 149-174, 2017
miRNAgFree: prediction and profiling of novel microRNAs without genome assembly
EL Aparicio, A Rueda, B Fromm, C Gómez-Martin, R Lebrón, JL Oliver, ...
bioRxiv, 193094, 2017
Draft Genome Sequences of Seven Multidrug-Resistant Acinetobacter baumannii Strains, Isolated from Respiratory Samples in Spain
G Labrador-Herrera, R Álvarez, R López-Rojas, Y Smani, ...
Genome announcements 4 (2), e00083-16, 2016
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