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Dustin Shigaki
Dustin Shigaki
Postdoctoral Fellow, Johns Hopkins University
Verified email at jhu.edu
Title
Cited by
Cited by
Year
Integration of multiple epigenomic marks improves prediction of variant impact in saturation mutagenesis reporter assay
D Shigaki, O Adato, AN Adhikari, S Dong, A Hawkins‐Hooker, F Inoue, ...
Human mutation 40 (9), 1280-1291, 2019
452019
Enhancer predictions and genome-wide regulatory circuits
MA Beer, D Shigaki, D Huangfu
Annual review of genomics and human genetics 21 (1), 37-54, 2020
212020
Regulatory enhancer profiling of mesenchymal-type gastric cancer reveals subtype-specific epigenomic landscapes and targetable vulnerabilities
SWT Ho, T Sheng, M Xing, WF Ooi, C Xu, R Sundar, KK Huang, Z Li, ...
Gut 72 (2), 226-241, 2023
182023
Dynamic network-guided CRISPRi screen identifies CTCF-loop-constrained nonlinear enhancer gene regulatory activity during cell state transitions
R Luo, J Yan, JW Oh, W Xi, D Shigaki, W Wong, HS Cho, D Murphy, ...
Nature genetics 55 (8), 1336-1346, 2023
13*2023
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods
N Null, S Jain, C Bakolitsa, SE Brenner, P Radivojac, J Moult, S Repo, ...
Genome Biology 25 (1), 1-46, 2024
32024
Machine learning identifies activation of RUNX/AP-1 as drivers of mesenchymal and fibrotic regulatory programs in gastric cancer
M Razavi-Mohseni, W Huang, YA Guo, D Shigaki, SWT Ho, P Tan, ...
Genome Research 34 (5), 680-695, 2024
2024
Critical assessment of genome interpretation consortium. CAGI, the critical assessment of genome interpretation, establishes progress and pprospects for computational genetic …
S Jain, C Bakolitsa, EB Steven, P Radivojac, J Moult, S Repo, AH Roger, ...
Genome Biology 22 (22; 25 (1): 53.), 1-46, 2024
2024
Machine Learning Sequence Modeling Identifies Gene Regulatory Responses to Bone Marrow Stromal Interactions in Multiple Myeloma
M Razavi-Mohseni, D Shigaki, MA Beer
Blood 142, 4144, 2023
2023
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