| Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 | 150 | 2016 |
| A global map of the protein shape universe X Han, A Sit, C Christoffer, S Chen, D Kihara PLoS computational biology 15 (4), e1006969, 2019 | 22 | 2019 |
| Navigating 3D electron microscopy maps with EM-SURFER J Esquivel-Rodríguez, Y Xiong, X Han, S Guang, C Christoffer, D Kihara BMC bioinformatics 16, 1-9, 2015 | 22 | 2015 |
| Human and server docking prediction for CAPRI round 30‐35 using LZerD with combined scoring functions LX Peterson, H Kim, J Esquivel‐Rodriguez, A Roy, X Han, WH Shin, ... Proteins: Structure, Function, and Bioinformatics 85 (3), 513-527, 2017 | 17 | 2017 |
| Shrec19–protein shape retrieval contest F Langenfeld, A Axenopoulos, H Benhabiles, P Daras, A Giachetti, X Han, ... Eurographics Workshop on 3D Object Retrieval, Delft, The Netherlands, 25-31, 2019 | 12 | 2019 |
| Classification in cryo-electron tomograms I Gubins, G van Der Schot, RC Veltkamp, FG Förster, X Du, X Zeng, Z Zhu, ... SHREC’19 Track, 2019 | 10 | 2019 |
| VESPER: global and local cryo-EM map alignment using local density vectors X Han, G Terashi, C Christoffer, S Chen, D Kihara Nature communications 12 (1), 2090, 2021 | 9 | 2021 |
| Protein 3D Structure and Electron Microscopy Map Retrieval Using 3D‐SURFER2. 0 and EM‐SURFER X Han, Q Wei, D Kihara Current protocols in bioinformatics 60 (1), 3.14. 1-3.14. 15, 2017 | 9 | 2017 |
| Study of the Variability of the Native Protein Structure. X Han, WH Shin, C Christoffer, G Terashi, L Monroe, D Kihara Encyclopedia of Bioinformatics and Computational Biology (3), 606-619, 2019 | 8 | 2019 |
| Protein shape retrieval: SHREC'17 track N Song, D Craciun, CW Christoffer, X Han, D Kihara, G Levieux, ... Proceedings of the Workshop on 3D Object Retrieval, 67-74, 2017 | 5 | 2017 |
| SHREC’17 Track: Protein Shape Retrieval N Song, D Craciun, CW Christoffer, X Han, D Kihara, G Levieux, ... Proceedings of the Workshop on 3D Object Retrieval, 3Dor 17, 67-74, 0 | 1 | |
| Vesper: Global and Local Cryo-Em Map Alignment and Database Search using Local Density Vectors G Terashi, X Han, C Christoffer, S Chen, D Kihara Biophysical Journal 120 (3), 84a, 2021 | | 2021 |
| Computational Methods for Protein Structure Comparison and Analysis X Han Purdue University Graduate School, 2020 | | 2020 |
| Fast Shape-Based Global and Local Electron Density Map Search J Esquivel-Rodriguez, X Han, C Christoffer, X Kang, L Monroe, D Kihara Biophysical Journal 108 (2), 190a, 2015 | | 2015 |
